Detail information of AfisC1G00953


Location
GeneChrStartEndStrand
AfisC1G00953chr1158516550158541979+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264784.12.9e-172histone-lysine N-methyltransferase ASHR3
SwissprotQ949T8.11.5e-128Protein stamen loss
trEMBLA0A5P1EYT52.1e-172Histone-lysine N-methyltransferase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G30860.144.901e-123 440ASHR3;SDG4SET domain group 4

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Ortholog group
SpeciesGenes
Allium cepag469378.t1
Allium fistulosumAfisC1G00953
Allium sativumAsa7G00993.1
Arabidopsis thalianaAT4G30860.1
Oryza sativaLOC_Os02g39800.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00856.25SETFamily35345870.22.4e-19

Gene Ontology
AccessionOntologyName
GO:0000785Cchromatin
GO:0003712Ftranscription cofactor activity
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0006281PDNA repair
GO:0006355Pregulation of transcription, DNA-templated
GO:0009653Panatomical structure morphogenesis
GO:0010224Presponse to UV-B
GO:0010228Pvegetative to reproductive phase transition of meristem
GO:0010452Phistone H3-K36 methylation
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0018024Fhistone-lysine N-methyltransferase activity
GO:0031399Pregulation of protein modification process
GO:0035258Fsteroid hormone receptor binding
GO:0042974Fretinoic acid receptor binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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