Detail information of AfisC1G01137


Location
GeneChrStartEndStrand
AfisC1G01137chr1194535152194539567-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020251948.15.0e-72myb family transcription factor EFM-like
SwissprotQ9FPE8.14.2e-55Protein HRS1 HOMOLOG 3
trEMBLA0A5P1FV783.6e-72HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G25550.147.409e-67 250myb-like transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag274429.t1
Allium fistulosumAfisC1G01137
Allium sativumAsa4G02215.1; Asa7G01207.1; Asa7G06661.1; Asa7G07491.1; Asa7G07492.1
Arabidopsis thalianaAT1G13300.1; AT1G25550.1; AT1G68670.1
Oryza sativaLOC_Os02g22020.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain17322430.72.4e-07

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005739Cmitochondrion
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009409Presponse to cold
GO:0009507Cchloroplast
GO:0009555Ppollen development
GO:0009788Pnegative regulation of abscisic acid-activated signaling pathway
GO:0009908Pflower development
GO:0016036Pcellular response to phosphate starvation
GO:0032107Pregulation of response to nutrient levels
GO:0055062Pphosphate ion homeostasis
GO:0080022Pprimary root development
GO:1901699Pcellular response to nitrogen compound

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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