result

Gene information

Detail information of AfisC1G01153

Location

Gene	Chr	Start	End	Strand
AfisC1G01153	chr1	196560755	196565097	+

Sequences

CDS

>AfisC1G01153
ATATTCATTAATGTTCCTTGGTGGTATCTTGCCTACAACCGAGTAATTAGTCCATTCTTCACTCAAAGAACCAAGAGCAAGTTTGTTTTTGCCGGTCCTTCCAAATCCACCGAAACTCTTTTCAAATACATAGCACCAGAACAAGTTCCTGTTCAATATGGAGGTCTTATCAAGGATAACGATCCTAATTTCACCGTTGCTGATCCTGTTACTGAGGTCACTATTAAGCCTACAAGCAAGCACATAGTTGAAATTCCAACTAAAGAGGGAAGTGTACTTATATGGGAGCTTAGAGTTCTAGGCTGGGAAGTGAGTTATGGAGCTGAGTTTTCTCCAGATGCAGAAAAGGGATACACAGTTATTATTCAAAAGGCTAGAAAATTTACTGCCACCGATGAAGCTTACGTGAAAAACAGCTTCAAGATTGGTGAACCAGGCAAAGTGGTTCTGACCATCGATAACACTTCATCAAAGAAGAAAAAACTTCTCTATCGATACTCCAAAATCACAATATTGCAATCAGGCGGTTCAAGAAGGTCCGCTGGTGTTAAAGGATCGTCTAGTTCAGTTGAAAAGCTTGGAAGGGAGATGCTAGAGTTAAGAATAAAAGACAAAAGAAGGGACCTGGAGGATGACAATGATTTTGAGCTAGATGTTGTAGATGGAAGGGGAGCTGAAGCTGGGCATATAATTGCCACTACCATTGGTGGTCAAAATGGTCAGCCTAAGCAGGCAATTACATACATAGCAGAACATGTAATAGGAACTGGGTCTTTCGGGGTTGTATGTCAGGTTCTTCAAGACAAGCGTTACAAGAACAGAGAGTTGCAAATAATGCACATGTTAGACCATCCTAATATTGTTTCTCTTAAGCACTGCTTCTTTTCTACAACTGATAGGGAAGAAATCTACCTGAATCTCGTTCTTGAATTTGTGCCCGAGACTGTCAATCGTGTTGCTAGGCAGTATAGCAAGATGAGACAACATATGCCTCTCATATTTGTTAAACTATATACCTATCAGATATGCAGATCTCTTGCTTACATTCACAACTGCATTGGCATTTTCCATCGAGACATTAAACCTCAAAATTTGCTGGTAAATCCACATACTCATCAGCTTAAATTGTGTGATTTTGGTAGTGCAAAAGTTCTGGTGAAAGGAGAGCCAAACATCTCTTATATCTGCTCAAGATATTATCGTGCTCCGGAACTCATAAATTCGTAG

Protein

Gene

>AfisC1G01153
ATATTCATTAATGTTCCTTGGTGGTATCTTGCCTACAACCGAGTAATTAGTCCATTCTTCACTCAAAGAACCAAGAGCAAGTTTGTTTTTGCCGGTCCTTCCAAATCCACCGAAACTCTTTTCAAGTTAGTAAAAAGAAAATCAAACAATACATCTCTTTTAGTGTATTCCAAACTTTACTAAAATTATGTTGTATGCTCGATCAGATACATAGCACCAGAACAAGTTCCTGTTCAATATGGAGGTCTTATCAAGGATAACGATCCTAATTTCACCGTTGCTGATCCTGTTACTGAGGTCACTATTAAGCCTACAAGCAAGCACATAGTTGAAATTCCAACTAAAGAGGTAAATCACTTTCCTCTACATAGTGAACTTTCTTGCATCCTCTATACCTATTTGTAAAGAATTCAAAAAACTTATTATTATTATTTTTTGGTTGAGTTATAGGGAAGTGTACTTATATGGGAGCTTAGAGTTCTAGGCTGGGAAGTGAGTTATGGAGCTGAGTTTTCTCCAGATGCAGAAAAGGGATACACAGTTATTATTCAAAAGGCTAGAAAATTTACTGCCACCGATGAAGCTTACGTGAAAAACAGCTTCAAGATTGGTGAACCAGGCAAAGTGGTTCTGACCATCGATAACACTTCATCAAAGAAGAAAAAACTTCTCTATCGATACTCCAAAATCACAATATTGCAATCAGGTTCGACCAAAACCAGTCTACCTATATTGAGTCGATTCTCTTATTTGATAGAAGAAAATGTTGAGTTAAGATTTGGAGTACATATACTATTACACCTCATAGCCAATACTATCAATATGTTATTAAAAAAAAGAACTGGCTCTTTTTTTGAACATCGTTTAACTACCATCAGTTCTAGAAGTTGATTTTCTAAACTATTGGACTAAAACCGTTTGAATTTTTTTTGGCTAATTGGTCGAGGTATGTACTGTAAGGTTAGATGCATATTCTCCTAGGAGTTTACAGATATTGTCTAGTCACTAGGGTATTAAATTAAACATCATATCTGAAATATTAATGCATTGCCTTGCACGTATTAGAACCATATTGATGTAATATAGCATGAGAGTCGATTCTGGTTAGTAGCTTTTGTGGGCATATAATAATGAATACTTGATACTTAACTAGGAAGAAATATATAAAATGAGAAAGTTCCCCAAGCACTACAAGTTAATATACAAAATCCCTCACTACTGAATTTAAAAAAAAGGCAAAAATAGATAAGTGCTCCTTTTGCGGATTAGAAATTTAATACATGCCGAAATTCAAATAGTATTGAAATATGCACTGAGAAGAAGATGCACATAAAGATCGGTAATTATAAGATAGAAACAATTGTTAACCTTACAAAACAGATGTTACAGAGTAACTCTGTTATTTATTACCGCAAAGCTGGTAAAGACTACATGAGGTTGAACTAGATATGTACATAGGTTTGTAATAATTCAGACTGCTTACTTACATTCAGTTTTATTTTGAGAAAATTGTAGGCAATAATATTGTTATTGGCCCATATTAAGGTTTTTATTATTCGTAGATATTTTTTGCTTGCAATAGCAGAAAAGTTTATAAATTTTCTGGAGGAGGAATATTTGTAATAATTCAGTCGTCGTAAACTTGAAATTCTGCTGTTTGTTTGGAAATTTGGAATGTTTTAGTACCATTATTCAATCATCTGCTTCAGAAGTAGTTTGATGTTTGCAGTTTGCTTTTATGTATGAAATTTATCTAGCAAATTTTTGATTTTGTATGAAGTACTATTTCTTTCTGTAGCTTGTAACATCATCACTTCTGATTTTTTTTCCTCCTGATATCGATAATTGATTTCCACTCTAAACATTTTACGCACTTTACTAAATTTTGAATGTTTAATTGCATGATCTAAAAGAATCGTGCATAATATATTCAGAATTCATTACACTCAGTAAAACGAATAAGTGCTCTTATAGAGAAGGTTAAACACAAGGAAACTTTCAAATCAAAATTCATTTGGTTATATATAGGGTTGATATGTATGTTTTCGATGTCCAATTGATTTACAAATGATTCAGTCATAGTAATTCTCCTTGTATCAGAAAACAATACCTTAATGAAAGAGCAATGAACCAATGATATACATGTTGTGTTCAGATATTGATTTATGCAAGCAGTAATGCATATCTGTAGTTTTGTTAAGAATTTGATTTTAGATAACAATTTTTAGAGGTTAAGTTGAATAGATTCAGTTATAAGGTATGGCCGTTACTTATTCCAGTTGAACTTTTTGCAATCAGTGATATGGTGCTCATGACCGAAGATTAAAGAGGAAATAATATAATGCAGATGGCATCTTCTATCACAAGGAAAAGTGCTGTAGGCGGTTCAAGAAGGTCCGCTGGTGTTAAAGGATCGTCTAGTTCAGTTGAAAAGCTTGGAAGGGAGATGCTAGAGTTAAGAATAAAAGACAAAAGAAGGGACCTGGAGGATGACAATGTAAGATTCTAAACTTAATTATCGCCCTATAAGGTCATAAATCATAAATTCTTGTAGGGTAGACTTGGAAGATTTGCATCATGCCATCTTACACAGTATATAAAGCATGAGTTTTTCCATAATCGCAAAGTATGGTTTACTTTACTTTAGGATTTTGAGCTAGATGTTGTAGATGGAAGGGGAGCTGAAGCTGGGCATATAATTGCCACTACCATTGGTGGTCAAAATGGTCAGCCTAAGCAGGTTCAGAATTATTCTTCAATTTTCCTCTTACACATAACTGAATCATTTTCAGTAGCTAATATGTAGACATCAGTAATCATTCAACAGTTGCTCTATCAGGCAATTACATACATAGCAGAACATGTAATAGGAACTGGGTCTTTCGGGGTTGTATGTCAGGTATCTTCCATTTCTTTGTCTAGAGAAAAAGTATATTGATAACCATATGAGAATGTTTTCTTTTTCCTTCAGGCCAAATGCAGAGAAACATGAGAAATAGTTGCAATCAAGAAGGTTCTTCAAGACAAGCGTTACAAGAACAGAGAGTTGCAAATAATGCACATGTTAGACCATCCTAATATTGTTTCTCTTAAGCACTGCTTCTTTTCTACAACTGATAGGGAAGAAATCTACCTGAATCTCGTTCTTGAATTTGTGCCCGAGACTGTCAATCGTGTTGCTAGGCAGTATAGCAAGATGAGACAACATATGCCTCTCATATTTGTTAAACTATATACCTATCAGGTATGCCTTATTCATGTTAACATCATATAAAACATAAAAAATAATGTTCATAGAAATTCTAGCACATTTAATTATATATTCTAGCAAATGCAGTGTTGTGACTAAGTGAATTGAATGCTGAGTTTTCATGTCTACATTGGTGTAGATGAATGTATATTTTAACAAAACCATTGTATCAGATATGCAGATCTCTTGCTTACATTCACAACTGCATTGGCATTTTCCATCGAGACATTAAACCTCAAAATTTGCTGGTGAGTTTAGTTTATAAACAATCCTATGGTGGTTCTCATTTCTGTGTATATGTATTTTTGCATTTATTTTTTTGAAGTTGCTTGAGTTACAAAAAGTCCTTTCATTCTGCCTGATTATCATATGTGCATTATTATTATTATTATTATTATTATTATTATTATTTAAAGTGCCTTGGAGAAAAGATTATAACAAATTGTGGTACATACTGTGTTTAAGTGGTGTATTTAGGTTTAATATTGATGTATTGCTTTGGCACTTATGTAGCCAAGTTCTCCACAAAAGATTTTTTTTTCAGATGCTATTTCTAATATCTCCATGGTATTATTAGAATTTTATGACTGATTAGCTAGCAATAAAAATTGCAATTACACAACATAATCTTACGGTGCTAGCTGATGTAGCGTGAAGTAGAAAAGGAATATAATCGTAAACCACAAAGAAAAAGAAAGTTAAAAATTTAGAATCCATCAGAAATAATCAAAATAATTTCTTGGTGTGAATTATTTCTCTTGTTGGTTTGTAATATGCTTTACCTGTTTCAGGTAAATCCACATACTCATCAGCTTAAATTGTGTGATTTTGGTAGTGCAAAAGTTCTGGTAAGTCTTCATCGGCCTTAAGCATATGTATAAAACCATTGAACTAAGTATGAATTGCTATGATATTTGTTACATTGTTCAGGTGAAAGGAGAGCCAAACATCTCTTATATCTGCTCAAGATATTATCGTGCTCCGGAACTCATAAATTCGTAGATATTCATCTTTCCTGTAAATGTTATTCAGTTGCTGAAGCTTATGTACCATGTACCACCAACTGCCGGTTATCATCAGAGCGTGTGGAACA

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3775799.1	9.3e-105	Shaggy-related protein kinase kappa
Swissprot	Q9FVS6.1	1.9e-94	Shaggy-related protein kinase 42
trEMBL	A0A443P1Q2	2.0e-104	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G57870.1	68.70	2e-98	356	ATSK42;SK42	shaggy-like kinase 42

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G01153	AT1G57870.2	246	62	2	175	406	10	254	68.70	2e-98	356
AfisC1G01153	AT1G57870.1	246	62	2	175	406	10	254	68.70	2e-98	356
AfisC1G01153	AT1G57870.3	246	62	2	175	406	10	254	68.70	3e-98	355

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00650.17	CRAL_TRIO	Domain	2	55	42.0	6.8e-11
PF00069.22	Pkinase	Domain	273	407	108.0	4.6e-31

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0002119	P	nematode larval development
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0004842	F	ubiquitin-protein transferase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007052	P	mitotic spindle organization
GO:0007281	P	germ cell development
GO:0009507	C	chloroplast
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009792	P	embryo development ending in birth or egg hatching
GO:0009933	P	meristem structural organization
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0030178	P	negative regulation of Wnt signaling pathway
GO:0032436	P	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880	P	regulation of protein localization
GO:0040010	P	positive regulation of growth rate
GO:0040011	P	locomotion
GO:0042538	P	hyperosmotic salinity response
GO:0043652	P	engulfment of apoptotic cell
GO:0046777	P	protein autophosphorylation
GO:0060069	P	Wnt signaling pathway, regulating spindle positioning

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K19996	SFH5; phosphatidylinositol transfer protein SFH5	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network