result

Gene information

Detail information of AfisC1G01232

Location

Gene	Chr	Start	End	Strand
AfisC1G01232	chr1	212370518	212376300	+

Sequences

CDS

>AfisC1G01232
ATGGATGAAGAGGGAATTTCATGGGTGAGGAGAGCAAAATTTTCACACACTATTTGCTACCGGATAAGTGATTATTCAATAGGAGCAACTCTTCCTTTCCATTTAAGCTCCAATCATGGTCTAGTATTGACGCCTAAGGGTTCAAATCAAAGTCATTCTAAGTTGGCTTCAATCTCATTGCCTGTTTCTCATGATATAAAATTTGATGCAGAAGGTTCAAGTGTAGAATCTCAAACTGTTACTGAAACTTTGAGTTCAGATTCCTCAAGCCAATCTTCTAGTTCTAAACTAAATAAGTTAGGTTCTAGTTCGGTATCTAATATTTCAGTAGGTGCCCAGTTAGGTGAAGATTCTCATAAGTCTAAGCTTTTTAGCAGTCGACAAAAGCTTGGTTCAAAACCAAAGCAGAGATCATTCTCTGCTCTTCCTACGTTAAAGATACCTGACAAATGTTTTGAAGCTAATGCTAAAGTAAAAGAGAGAAGATATTCAACTCCTCCCCCTACAACGAGTGGAGACACAAAAATATTCGGTAAATCGATGTCGAAAGAACTGTCTACTCCACTTAAAAGTCCATTACAGCATTTCTCGTCCATGAAATCAAATGATACAGCGAAAAGTAAAAAGGATAACTCATGGACTAGATACTTCGATAAGGGTGTTGGGAGAGTTACTGCAGTGGATAGTACAGAAGAATGGATGGTTGATCTCTCAAAATTGTATTTAGGGCTTCGATTTGCTTCTGGTGCTCATAGTCGTTTGTATCATGGAGTTTATAATGATCAAGCTGTAGCTGTAAAAGTAATTAGGCAACCTGACGATGACGACAATGGAGTAGTCAGTGCTCGGTTAGAGAAAGAGTTCAGTAGAGAAGTTAAATTTCTCTCTCGTTTACATCATCGCAACGTGATAAAGCTAGCTGCAGCATGTAGAAATCCTCCAGTATTTTGCATCATAACTGAATACCTATCTGGTGGATCCCTACGTTCTTTCATACACAAACTCGAAAGTGCCCTTTCACTTGAAAAAATCATTCCTATAGCTTTGGATATTGCACGAGGAATGGAATATATTCATTCTCAAGGGGTCATTCACCGCGACTTAAAACCTGAAAATATTCTATTTGATGAGGACTTATGTGCTAAAATAGCTGATTTTGGGATTGCTTGTGAAGATGTAAATTGTGATGCATTAGCTGAAGACACTGGAACTCTCCGCTGGATGGCTCCTGAAATGATAAAGCACAAACCATATGGGAGGAAAGTGGATGTGTACAGTTTCGGATTAGTGCTGTGGGAGATGTTGACTGGAAAAATTCCCTACGAGGAGATGACTCCTATTCAAGCAGCATTTGCAGTGGTTGACAAGAACATGAGGCCAGTAATACCTGCTGATTGTTCTCGTGCAATGGGAGCCTTAATAGAACAATGTTGGGCATCGAACCCTAGTAAAAGACCTGAATTCTGGCAAATTGTGAAGGTTTTTGAGCAATTTGAATCGTCTTTTGTTAGAGATGGCACACTTAAGTTTGTTCAAAGCATGACATGCCAAGACGATAAAAAGCAAATTTACAACTGGATTCAAAAGCTTAAAAACTCTCATGCAAAAGGTTCTATTGCTCCTATGCCTAGATTGTCCTAA

Protein

Gene

>AfisC1G01232
AAAGGTTGCTTGGTTGCTTCTGTTCATTTTCAAGGTATTTTGCCTTTTTCCCCCTACAGAAATGAACTATTTAAATGATTAATATAATTAAATTGGGTAGGTTTTTGGTTGTGAAAAATCCGTACTCGTTGAATGTAAAGATAATTTCGTAACAATGGAGAGATTTTGATGTGATTTCAGTATCAATTGCATGAGTTTTTGAGGATTTTGCTTTAAAATTTGATTTTGATGTGGTTTTCCTGTCATTCGCATGATATTATAAAAGGTATAAAATAATTTATTTGCAGTTAAATTTAGTTTTATTGGTTACGAATATAATGATGATGTTATACCTAGAAGACTTTCCTCTTTACAAATTTGTCTAATTTCTTTGTTGCAGGATGTCAACATTCTTCGTAAGATGGAATTCATCCTGTGAAGGTTCCATTTGAAAGTCTTATCTTTTAATAATTCAATTTTCTTTTGGTTTTTCAAATCAATCCCTTTCTTGATTTGAAAGTATATGATGTGGATGGAGTCAATGTTGGAAAAATTCTATGATAAAATTACTATTGTTGCTTTTGGATTTTCTCCAACGTCTACAAAGGTTTTATAGCATTTGATTAAATTTCCATATCTACTTCTTCAAATACAATAATCAATGGATGAAGAGGGAATTTCATGGGTGAGGAGAGCAAAATTTTCACACACTATTTGCTACCGGATAAGTGATTATTCAATAGGAGCAACTCTTCCTTTCCATTTAAGCTCCAATCATGGTCTAGTATTGACGCCTAAGGGTTCAAATCAAAGTCATTCTAAGTTGGCTTCAATCTCATTGCCTGTTTCTCATGATATAAAATTTGATGCAGAAGGTTCAAGTGTAGAATCTCAAACTGTTACTGAAACTTTGAGTTCAGATTCCTCAAGCCAATCTTCTAGTTCTAAACTAAATAAGTTAGGTTCTAGTTCGGTATCTAATATTTCAGTAGGTGCCCAGTTAGGTGAAGATTCTCATAAGTCTAAGCTTTTTAGCAGTCGACAAAAGCTTGGTTCAAAACCAAAGCAGAGATCATTCTCTGCTCTTCCTACGTTAAAGATACCTGACAAATGTTTTGAAGCTAATGCTAAAGTAAAAGAGAGAAGATATTCAACTCCTCCCCCTACAACGAGTGGAGACACAAAAATATTCGGTAAATCGATGTCGAAAGAACTGTCTACTCCACTTAAAAGTCCATTACAGCATTTCTCGTCCATGAAATCAAATGATACAGCGAAAAGTAAAAAGGATAACTCATGGACTAGATACTTCGATAAGGGTGTTGGGAGAGTTACTGCAGTGGATAGTACAGAAGAATGGATGGTTGATCTCTCAAAATTGTATTTAGGGCTTCGATTTGCTTCTGGTGCTCATAGTCGTTTGTATCATGGAGTTTATAATGATCAAGCTGTAGCTGTAAAAGTAATTAGGCAACCTGACGATGACGACAATGGAGTAGTCAGTGCTCGGTTAGAGAAAGAGTTCAGTAGAGAAGTTAAATTTCTCTCTCGTTTACATCATCGCAACGTGATAAAGGTCACTATTTCAACATTCATATCATATATTCATTAAAGTTTGCATCATTCTGAAATGTTTTTGTGTGAAACATGATTAAGTCGGTTTAACAATTTAGGTATATTTCAGCAGATTCTTAGAAATACCTTTTTTACTTTACGAGGATCTTGATTATGGTGAAAACAATCTGTGATTGTGGATGCTGATATGAAAGTCCTATAAAATGGTTAACTATAAAAAAAATTGAAATACACACTGCTAGAACGATAGTAAATGGTTTAAAATGAGCAGTCCATTAGTTAGCATAATATACTGGTTTGGACTTCAAGGGGCTATCAATATTATCATGCCAATTTATGGTTTACTCATTTTAAGTGTAAGAAGACTTATCATAAACACTTTTATGGTATTTCTTCATGTATCTTCTAATTGTTCTTTTTTTTTTAATATGATAAAAGCTAGCTGCAGCATGTAGAAATCCTCCAGTATTTTGCATCATAACTGAATACCTATCTGGTGGATCCCTACGTTCTTTCATACACAAACTCGAAAGTGCCCTTTCACTTGAAAAAATCATTCCTATAGCTTTGGATATTGCACGAGGAATGGAATATATTCATTCTCAAGGGGTCATTCACCGCGACTTAAAACCTGAAAATATTCTATTTGATGAGGACTTATGTGCTAAAATAGCTGATTTTGGGATTGCTTGTGAAGATGTAAATTGTGATGCATTAGCTGAAGACACTGGAACTCTCCGCTGGATGGCTCCTGAAATGATAAAGCACAAACCATATGGGAGGAAAGTGGATGTGTACAGTTTCGGATTAGTGCTGTGGGAGATGTTGACTGGAAAAATTCCCTACGAGGAGATGACTCCTATTCAAGCAGCATTTGCAGTGGTTGACAAGGTATTCTTACTCTTAATTTTAACATTATTCTTTCTTTACATGACATTTTGTTTTCATTGGAGAAAAACTTCTGCCATATCCTAAAGATATAGGAAAGGATATATTGTATCCTAATGAAATGAATTCTACCATGGATGGAGCTTAAAGCTAAGTATTAAATCCCTTAAATAATGAGAGGTACTAATAGTACTTACGAAGATGAAGTGGGGATGATATGAACCTAAGCTTAAATACTCCTAAGCAGAGCTTAGAGCCCCTGATAAATTAATATGCCTTAAAAACAAATTTTAGCTAGATATAATTAAGATGAATATTTATCTTGCATGCACTCTAAATTCCTAACCACACCGTGCTTAGTTTTTTGCAAGGATACCAAGTATCAAACATACATGTTGTCTTGGTGCTTATGTCAGACAACTGTAGTTAGTAAAATCCATTCCAAATCACATATCTTTTGAAAGGGCAATGGAAATCTTATATTCATAAAGGTCTAGCAAAACATGGATAAAGAAATTTCTTAGGCAACAGATCTCTTGTGATGCATCATAATCAGTATTGATGTGCCCCACACACACAGGCAACAGATCCCTTGTGATGCATCATAATCAGTGTTGATGTGCCCCACACACACACGCACACACGCGCGCGTGCACACACACACACACACTCTCCATTGTTTTCGATATGTTTTCACTGTGGCTTCCTTTGTCATATACTAGCATATCAACATACACAATATGCAGACATTTGTGTTTATACATGTGTTTCTAAGGAAGTTTAAACGTAAAGAATTGATTTGAAGATAAATTCTCCAAACACAATAAGGGATGGGAGAAGGGCGGATATGATTGGTGTAGGGTGGTCAAAATTAGAGGCTTCATTTTTTTTTATAGTAATGAAAAGAAATAATTAGTGAATTGGATATTGGATAAAATTTTATAAATTCTAGTGTATTTATTTTCTTTTTTTTAATAACAATGGAGAGTGGAATAGTTCCGCATCTTAGGAATCAAAATATTGTTCCTATTTAAACTGTTTTGTAGGGTACCCAACTGGGCGCACGCCGCCTCTACTGTTCGATCAACCTTGTTGAGTTTGTGTCCAATATACTTTTCAACAAACTTACAAAACGGACCGAGCTTAGGAAAAACAAATCAAAGGTAGAACCGGCAACTGGGCGACCATTTCATGCAGGATTTTACAAACATGAGAGTTGGAACTGGTCGAACGGTTTCCTTAGGGTGGTCTATCTGTTGAGATTTTTTTGAATATAACAATAATTTTCTCAAATTATTTTGTTGAAATGTTGCATCCTTGCAGTTGCAACTCTTTGTAGCCCGCCACTCAAAAAAATTCTAAAACACTTCTCCTCTCCGACTTCATCTTTGTATTTTTAGTGTTAAGAGGTATTTCAGGTCTTGTAATTCTGCATTTTACAAAACTCAAATTTGTTGTACTGCAGTTTTCAAAGCATTAAAAAATAAAAATCGATTTCATTATTGCTAAAGCAGTGGATTATAGAGATCTAAAAGCTGTGGATTACTTTGTAACTTGGAAAAGAATTTGCAAACTTGATGCATTCACTTAATAAATAGCGGTGATGCAAAATATCTTTTTAAGAAACAATGACTATAAAGTAATCCGAGTTGCTTTAAAATCATCACCAACATTACTGATAGCTGAAGTCCACCATCAAACAGATTTTAAACCAACATTGGCTCTCAGTGGTCAATTACTCTGAACACAGTCAAATTGATTTTTTTCTCCTTTTAATAAAAAAACATTTCAAGATAAAAGCAGTTAGTGATAGGGTTTATGTTATCAATTTATAGATGTGTCGCATTTCTTCTACTTATTCATACTAGCAGACAATAGAATCTTCTTGCCTTGATCGGTGAATCTAGTAAGGGTCACTTGCTTAGCAATTAAAACTGTTGTTTTTATTATTATATTTAACGTCTTGTGCATTTATAGAGGACGTATATACTATTATTATATATATCTTTCGCTAAGAAATCTTTATTGTCATTGATATTTCAATGATTTTAGTTTATGATCAACAAGATTTGTCCATACATAACCTCTCTAGCACCTATTCTATGTTAATCCAGCTGACATCTTTTTCAACATTGGCATAGTTAGAATTTTAGTGCATCCAGATTATATACCATCTTTAGAAGTATTAAGTACTTTGTTACATGTTCCGAGCAATGGTTGCAAATCAAAGGTCCATTGCGTGTAAATATATAATTTGCATTTAATATGAATTAGTTCTTATATACATGTTCTAAAAGTGGGTTGTTTGACGAATGCAGTATTTGCATGATTATTAGAAACAAAAAAGAGTACATACATAAGTCAAGATGTCAAATTTTAAGCCTGGATTTATGAAGAATTACCATATTGACATGTGAGGTGCACACTCATGTGCATTATGACCTGTGTATTTTCTAGCTATAACTCATAATAATATGATGAATAAACACGTGATGAATAAACATGCAAAAAAAATAAAAAAAATAAAATAAAATAAAATAAGAAGAAGAAGATGAAGAAGAAAAACTTAAGTGGGAACATCCATTAATATGGAATCTATAATTGATTTTTTTTAATATTTCTGTTTCATGTGACCATTTTTTAATAAGTACGTTGTATTAAATATTGTAGATAATTTGTTAATTATGTGCACACAAAAAAGTACAAGTTAATAGGACTTTATTATCGTTATATATGATCTAAAAAGGTGGACTGCAATCAATGTTTTCATGACTGAATTCATGCTTTTATTTATGATTTGTATGGAATGGGAATGAGTAGTAATAGGAAATATGGTATTTGCTTAATCTAATTATAATAAAAGATGTTAATTTTTCAGAACATGAGGCCAGTAATACCTGCTGATTGTTCTCGTGCAATGGGAGCCTTAATAGAACAATGTTGGGCATCGAACCCTAGTAAAAGACCTGAATTCTGGCAAATTGTGAAGGTTTTTGAGCAATTTGAATCGTCTTTTGTTAGAGATGGCACACTTAAGTTTGTTCAAAGCATGACATGCCAAGACGATAAAAAGCAAATTTACAACTGGATTCAAAAGCTTAAAAACTCTCATGCAAAAGGTTCTATTGCTCCTATGCCTAGATTGTCCTAAACATATACTAATTTTATTCTTGTAAATTCTAATCCCGCATAAGTTTAACTCTGAGTGGGTTTCTAATTGCTCAAATATCTTGTATAACGAGTAATTTAATTGTTACAGAGTGTTTAATGTTTATAGTGTGTTAAAAAAATGTTGTAATGATAATGAAAAATATCATCAAATTTGTTAATTAGTGGAAAAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245339.1	4.3e-190	serine/threonine-protein kinase HT1
Swissprot	Q2MHE4.1	3.2e-89	High leaf temperature protein 1
trEMBL	A0A5P1FQA4	3.1e-190	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G58950.1	49.45	1e-141	500		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G01232	AT5G58950.1	546	222	8	1	535	1	503	49.45	1e-141	500
AfisC1G01232	AT3G46930.1	419	200	7	126	528	35	448	47.26	1e-99	360
AfisC1G01232	AT1G62400.1	310	139	5	231	539	32	329	50.97	1e-92	337

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	245	494	208.7	8.4e-62

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000077	P	DNA damage checkpoint
GO:0000287	F	magnesium ion binding
GO:0002027	P	regulation of heart rate
GO:0002229	P	defense response to oomycetes
GO:0007010	P	cytoskeleton organization
GO:0005829	C	cytosol
GO:0004709	F	MAP kinase kinase kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0005783	C	endoplasmic reticulum
GO:0005524	F	ATP binding
GO:0005730	C	nucleolus
GO:0005769	C	early endosome
GO:0005802	C	trans-Golgi network
GO:0007050	P	cell cycle arrest
GO:0007257	P	activation of JUN kinase activity
GO:0008022	F	protein C-terminus binding
GO:0009314	P	response to radiation
GO:0009414	P	response to water deprivation
GO:0009658	P	chloroplast organization
GO:0009723	P	response to ethylene
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0010119	P	regulation of stomatal movement
GO:0012510	C	trans-Golgi network transport vesicle membrane
GO:0031013	F	troponin I binding
GO:0042733	P	embryonic digit morphogenesis
GO:0043065	P	positive regulation of apoptotic process
GO:0044822	F	poly(A) RNA binding
GO:0046777	P	protein autophosphorylation
GO:0055117	P	regulation of cardiac muscle contraction
GO:0086069	P	bundle of His cell to Purkinje myocyte communication
GO:1900150	P	regulation of defense response to fungus
GO:1900424	P	regulation of defense response to bacterium
GO:1903779	P	regulation of cardiac conduction
GO:2000031	P	regulation of salicylic acid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network