result

Gene information

Detail information of AfisC1G01531

Location

Gene	Chr	Start	End	Strand
AfisC1G01531	chr1	257603663	257605489	+

Sequences

CDS

Protein

Gene

>AfisC1G01531
ATGGTACGTTTTCCTTTTAGAAATTGTATCAACTTCATGTTGTCTATAGATCTCTTTGTAGTGGTTAAATGTATTATGCATAAATTTATGTCAAGGAAGCATTCTTTGAAAGCATTCTGCAATTTCACTGAATGTATTTTGTTTTGACAAAGCGATTTGGTCAAGCGCTTTTAATATACTGTGTTTAACGCTTCTTAACATCTTATGTTTCTTTTTTGTGTATCACATTGATCCAAGTATCAATTAATTAGATAAATCTCATAAAAGCCTTCTTTAAGTTTTAATGGGTTCAGCCCTTTCAAATCTTTAAAATGGAGTTTTTTTTATGAAATGAAATGGAGATTTTATTTATTTATTTACTCACTTTTGAGGGGTTTATTCCCTTAAATCCTAGGGCATCTCTTCATAAATTATCTAACATGTATCTTATATTAGGTATATGTTCCCCTAGAGAACATTGAATGTTAAGGCATTTGTGAACTTTGATTTTTATCGTTGACCTTAGTACGAAGGATCTTTATGTGCGGTAATTGTTAATTTTTCTAATATTTGAAACTAAATCACTGTCCTTCACCTCCATCTGTGTTTGTGTGATAATACGTCACCAACACTGAATGTTTATTCCCTTTTTTATATCTGATTCCAATTTATGGTGTAGTAAGACGAGATCAAAATTTCGAGGCTGCTCATGCATCCTCATGTTATTCGATTATATGGGATCATAGAGACAGAAATAGATATATATGTGGTAATGGAGTATGTGAAGTCAGGAGAACTTTTTGATTTCGTAGTTGAAATTGGGAGGTTACATGAGGATGAAGCCCGACGGTTTTTTCAGTAGGTAAAATATGAGCTCTTGATAAAGTTCTTGTAGAAGCCCCTTTACAATACTAATCCACTGCTTGATAATTACTTCAATTAGGTTAATGTGAGAAATGACATTTTTTTAATTATTGATAATTTTTCTACATTACAACAGTCAATGGTAGCTTCGTGGTCAAATATTTGCTAAGCATTGCCCATGTTTTGCCCTATATGTTATGGACTAAACCGTTTCTTGTGTCCTTACTTAGTGCAGATAGTATTTAAGAATGATTGCTTATGTAGTCTTTTTCTATCTTGCTGTGAAATGTAAGTTAAATTTTTGTGTAGCATGACAGTCTTAGTGGATCGAGCTTGTTCTTAACATACACTTGGGCGAATCAAAGGGATTTATGATTTATTCCTATCTCGGTTCAGACTTCTGTCGTTTGGCTCTTGCAACTTTACGCTTTAGCATTAGGATGCCCTTTGGGATCTATATATATATGATTATAATTTTCCATAAAATATTTATTGTCCACTTGCACTTATACAAAATATCCTTTTTATCTTTTGAGTCAGATTATATCTGGTGTTGAGTATTGCCATAGAAACATAGTATTCCATCATGATTTGAAGCCAGAAAACTTGCTATTGGATTCAAAGTGCAATGTTAAAATTGCAGATTTTGGCTTAAGTAACATCATGCATAATGGTCACTTTTTGAAAAACAAATGTGGAAGTCCCAATTATGCTGCGCCGGAGGTAAACTATACACCATAACTCATAGCGAAAAATTCCTGTATTTATTATTTGTTAGTTAGAGAATATTAGAAGCTTAATATTGTTTTTATCATGTAGGTCATCTCACAACTGTATGTTGGGCCTGAAGTTAACATATGGAGCTACGGTGTTATCCTTTATGCTCTTCTTTATCGCGCACTTCCTTTTGATGATGAGAATATTCCTAGTCTCTTTAAGAAAATTAAGGCAAGAAAATGTTTAATAACTGCTAATTGCAAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK64202.1	5.2e-45	uncharacterized protein A4U43_C07F23200
Swissprot	Q38997.3	2.7e-46	SNF1-related kinase 1.1
trEMBL	A0A5P1EEB5	3.8e-45	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G01090.1	83.02	3e-49	189	AKIN10;KIN10;KIN10;SNRK1.1	SNF1 kinase homolog 10

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G01531	AT3G01090.2	106	17	1	2	106	149	254	83.02	2e-49	189
AfisC1G01531	AT3G01090.3	106	17	1	2	106	126	231	83.02	3e-49	189
AfisC1G01531	AT3G01090.1	106	17	1	2	106	126	231	83.02	3e-49	189

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	2	104	119.5	1.4e-34

Gene Ontology

Accession	Ontology	Name
GO:0000187	P	activation of MAPK activity
GO:0003682	F	chromatin binding
GO:0030674	F	protein binding, bridging
GO:0005829	C	cytosol
GO:0004679	F	AMP-activated protein kinase activity
GO:0004691	F	cAMP-dependent protein kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0016055	P	Wnt signaling pathway
GO:0046872	F	metal ion binding
GO:0005524	F	ATP binding
GO:0005654	C	nucleoplasm
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006853	P	carnitine shuttle
GO:0007050	P	cell cycle arrest
GO:0008022	F	protein C-terminus binding
GO:0043066	P	negative regulation of apoptotic process
GO:0008284	P	positive regulation of cell proliferation
GO:0016032	P	viral process
GO:0009411	P	response to UV
GO:0009631	P	cold acclimation
GO:0010332	P	response to gamma radiation
GO:0010628	P	positive regulation of gene expression
GO:0014850	P	response to muscle activity
GO:0045722	P	positive regulation of gluconeogenesis
GO:0046326	P	positive regulation of glucose import
GO:0016239	P	positive regulation of macroautophagy
GO:0016324	C	apical plasma membrane
GO:0017148	P	negative regulation of translation
GO:0019900	F	kinase binding
GO:0031000	P	response to caffeine
GO:0031588	C	nucleotide-activated protein kinase complex
GO:0032007	P	negative regulation of TOR signaling
GO:0033135	P	regulation of peptidyl-serine phosphorylation
GO:0035174	F	histone serine kinase activity
GO:0035404	P	histone-serine phosphorylation
GO:0035690	P	cellular response to drug
GO:0042128	P	nitrate assimilation
GO:0042149	P	cellular response to glucose starvation
GO:0042304	P	regulation of fatty acid biosynthetic process
GO:0042557	F	eukaryotic elongation factor-2 kinase activator activity
GO:0042593	P	glucose homeostasis
GO:0042752	P	regulation of circadian rhythm
GO:0045542	P	positive regulation of cholesterol biosynthetic process
GO:0045821	P	positive regulation of glycolytic process
GO:0046318	P	negative regulation of glucosylceramide biosynthetic process
GO:0046321	P	positive regulation of fatty acid oxidation
GO:0046777	P	protein autophosphorylation
GO:0047322	F	[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity
GO:0048643	P	positive regulation of skeletal muscle tissue development
GO:0050321	F	tau-protein kinase activity
GO:0050405	F	[acetyl-CoA carboxylase] kinase activity
GO:0050688	P	regulation of defense response to virus
GO:0050995	P	negative regulation of lipid catabolic process
GO:0051291	P	protein heterooligomerization
GO:0055089	P	fatty acid homeostasis
GO:0060627	P	regulation of vesicle-mediated transport
GO:0070301	P	cellular response to hydrogen peroxide
GO:0071361	P	cellular response to ethanol
GO:0071380	P	cellular response to prostaglandin E stimulus
GO:0071456	P	cellular response to hypoxia
GO:1901563	P	response to camptothecin
GO:1901796	P	regulation of signal transduction by p53 class mediator
GO:2000505	P	regulation of energy homeostasis
GO:2001274	P	negative regulation of glucose import in response to insulin stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network