result

Gene information

Detail information of AfisC1G01600

Location

Gene	Chr	Start	End	Strand
AfisC1G01600	chr1	269504579	269509630	-

Sequences

CDS

>AfisC1G01600
ATGACGCACATTCACAAAACACGTACGAGGACGTACGTACTCCTGGTTGTTTGCTCGATCTTTCTAACATCACTTACAGTTTCGGCGCAACCGCCGCCTTCAAAAGCATCCTTCGCCCCCGCTGACAACTTCCTGATCGACTGCGGCGGCAGCGCTCCGATCACCAGCCCGGACGGCCGCATCTTCAAAACCGACTCCCAAGCAAACCCCTTCCTATCCGCTAAGGACAACATTCTCGTCTCCGTTCCCTCGGCCGACGGCTCCCCATCGCCTCTCTACCTCTCCGCTCGCATCTTCCACGACGAAGCAACGTACAGCTTCGGCCTCACCCAACCCGGGTGGCACTGGATCCGCCTCCATTTCTACCCGCTCACCAACTCCGACTCCAAACTCACCGACGCCGTGTTCTCAGTGAAAACCGACGACTACGTTCTCCTCCACAGCTTCTCCACCTCCGACAATAAGGGATTTATATTAAAAGAATACCTCGTGAACGCCACGACCGACCATCTAAACCTCAAGTTCATCCCGCTCCAGGGCTCCGCGGCGTTCGTCAACGGGATCGAAGTCGTCTCCGCTCCGGACGTCCTGATCACGGACGAGGCTACCTCGCTGTTCCCTGTAGGCCCAACCAATGGATTGAGCAACTACGGTTACCAGACGGCATACAGACTTAACGTCGGCGGGGCAGTGGTGACGTCGGCAAACGACACATTGGGACGGCAGTGGGAGACCGACGAGTCGTTCCTGCAGTCTGTGTCAACTGCTAAGAAGGTTAGCGTGAGTCCGAGCGTTGTGAAGTATGGAGATGGTATTTCACCGATTATTGCACCTAGCTCGGTATACGCGTCGGCGGTTAGGATGCAGGATGCGAGGGTGGGGACGCCCAATTTCAATATTACGTGGAACCTTAATGTCGACCCGGCGTTTCCGTACTTGGTTAGGTTGCATTTTTGTGACATTGTGAGTAAGAATCTTAATGATTTGTACTTCAATGTCTATATCAATGGTTTGACTGTGGCGTCGCCACTGGATTTATCGACTCTCACCGGGGACCTTGCAAGTGCCTACTATAAGGATGTTGTTGTTAATGCGTCGGTGGCTAAAGATAGAATTATTGTTCAGGTTGGTCCAGTGAAAGACGACACACGAACAATCGATGCAATTCTAAATGGAGTGGAGGTCCTAAAGATGAGCAACTCAGTGAACAGCTTAGATGGAGAATTCGGAGTCGATGGACAAAGGGCAGATGGGTCAACAGGTTCCAAAGCAATAGCAGTAGTCGGAATCACAATGGGGTTCGGTGCATTGGCCGGTGTGGCAGCAATGACCGTGAAATGGTACAAAAGACCCCAAGATTGGCGTAGACGTAACAGCTTCTCCTCATGGCTGCTACCCATCCACACAAATCCAACCAGCTTTACCAACACTAAAGGATCCGGGTTCGGGTCCCACAGAAGTGGAATGACGTTTTCATCCACTTTAGGTCTCGGCAGATGCTTCACTCTCGAGGAATTGCAAAATGCAACGAATGACTGGAATGAGAAAGCTGTGGTTGGAGTAGGTGGATTTGGAAACGTGTATTTAGGTGAATTGCTTGATGGTACTAAGGTTGCTGTTAAGAGAGGAAATCCTCAGTCCGAGCAAGGGATTACTGAGTTTCAGACTGAGATTCAGATGTTGTCGAAGTTAAGGCATAGGCATTTGGTTTCACTTATTGGGTATTGTGATGAGAATTCGGAGATGATACTGGTGTATGAGTACATGGCAAATGGACCTTTTAGAGATCATATTTATGGCAAGGACTTACCTGCTTTGACCTGGAAGCAGAGGCTGGAGATTTGCATCGGAGCAGCTCGGGGCCTGCATTATCTTCATACAGGTGCGGCAACAGGAATCATCCATCGTGATGTAAAAACAACAAATATCCTCTTAGACGAGAATTTTGTGGCCAAAGTCTCCGACTTTGGTCTTTCAAAAGATGGCCCTGGAATGGGTCAAAATCATGTCAGCACTGCTGTTAAAGGCAGTTTTGGATACCTGGACCCTGAATATTTCCGTCGACAACAACTAACAGACAAATCTGATGTCTACTCTTTTGGAGTTGTGTTATTGGAAACTTTGTGTGCTAGACCAGCCCTCGATCCTGCGCTTCCAAGAGAACAGGTAAATTTAGCAGAATGGGCAATGAAACAGAAAAGAAACGGATCAATTGAAAAGATCATTGATCCAAAATTGGTGGGATGCATAAATATAGATTCAATGAACAAGTATGTTGAGGCTGCCGAAAAGTGTTTAGCAGAATACGGCGTTGACAGACCATCCATGGGTGATGTGTTGTGGAACTTGGAGTATGCCTTGCAGTTGCACGAAGCCAATCCTCCAACTCCACCACCTCAGGGGGACTCTTCTTCCGACGACAAAGAAAAGGAAGCAGCCAAAGCTCCAGCTGCTACTGAACAAGACAACAACAGTTCATCGACCGAGACAACAACGGTAACAGAGAACTCTAGCACTGCCGTAGCAAACGAGCTCTTTGAACAAATCTCGGGAATGCAAGGGAGGTGA

Protein

Gene

>AfisC1G01600
ACATTTTGCGATCTCCACATTTCCTGCAGATTCATATCAACTATCTCTTGCTGCTTTCTTCTCCTTCAATCTCCCTCCCTTCTTCAGGGATCGGGAAACAACCCGTGAAAATGACGCACATTCACAAAACACGTACGAGGACGTACGTACTCCTGGTTGTTTGCTCGATCTTTCTAACATCACTTACAGTTTCGGCGCAACCGCCGCCTTCAAAAGCATCCTTCGCCCCCGCTGACAACTTCCTGATCGACTGCGGCGGCAGCGCTCCGATCACCAGCCCGGACGGCCGCATCTTCAAAACCGACTCCCAAGCAAACCCCTTCCTATCCGCTAAGGACAACATTCTCGTCTCCGTTCCCTCGGCCGACGGCTCCCCATCGCCTCTCTACCTCTCCGCTCGCATCTTCCACGACGAAGCAACGTACAGCTTCGGCCTCACCCAACCCGGGTGGCACTGGATCCGCCTCCATTTCTACCCGCTCACCAACTCCGACTCCAAACTCACCGACGCCGTGTTCTCAGTGAAAACCGACGACTACGTTCTCCTCCACAGCTTCTCCACCTCCGACAATAAGGGATTTATATTAAAAGAATACCTCGTGAACGCCACGACCGACCATCTAAACCTCAAGTTCATCCCGCTCCAGGGCTCCGCGGCGTTCGTCAACGGGATCGAAGTCGTCTCCGCTCCGGACGTCCTGATCACGGACGAGGCTACCTCGCTGTTCCCTGTAGGCCCAACCAATGGATTGAGCAACTACGGTTACCAGACGGCATACAGACTTAACGTCGGCGGGGCAGTGGTGACGTCGGCAAACGACACATTGGGACGGCAGTGGGAGACCGACGAGTCGTTCCTGCAGTCTGTGTCAACTGCTAAGAAGGTTAGCGTGAGTCCGAGCGTTGTGAAGTATGGAGATGGTATTTCACCGATTATTGCACCTAGCTCGGTATACGCGTCGGCGGTTAGGATGCAGGATGCGAGGGTGGGGACGCCCAATTTCAATATTACGTGGAACCTTAATGTCGACCCGGCGTTTCCGTACTTGGTTAGGTTGCATTTTTGTGACATTGTGAGTAAGAATCTTAATGATTTGTACTTCAATGTCTATATCAATGGTTTGACTGTGGCGTCGCCACTGGATTTATCGACTCTCACCGGGGACCTTGCAAGTGCCTACTATAAGGATGTTGTTGTTAATGCGTCGGTGGCTAAAGATAGAATTATTGTTCAGGTATGATCTGTGATTTAAATACTGAAGTTATATGATTCAGTTTCAGGTATGGAATTGCCAACTAAATGACTTCCGCAGTTCCGCATAACATCCATTATACAGGAAAAGCAAATAGATTTACATAAGAAATGGTATGAAAATACTAAATAATATTCACTCCTTGTAATATTATCATCATTTTTTAATCCAATGATTCCAACGGCTAAAGTTCTCAAAATGCCTTTATTATTGAGCTGACTCGTCCATAAGAAATGATAAAAATAAACATTTAGTTTCAATGAGAAACGTATGAAATTTTAAATTCGAACCTTGATAAAATCCTTTTCGTTTTTGTGTTACCAGATTATTGATTTTCATTATAGTCTCAGTATCAATTTATTATTTACTTTTACACTATTGATTCTTCACAGATTTCTTTACACACACACACTCGTGCATTCAGTATTGCATATTTTACTCTCTTTTTTCAAGTTTAATAATTCTCTTATCAAAAACTATTAACAAATGTAAAACTTGACTGTTTTCAATATATAATAATGACGATGATGGTGACGATGATAGTTTTTCTCACATGCATTGCATATGATATACAAAAGCAACCTAATCAAGATAATTTTAAAGCTTCAAGCTCAAGGGAGCTGTTAAAAGAACGTAAAATGTCGTAACAGAAAATTTTATGACACATAAAACGAAATTGATTCTCCATAGAATCATAGGAAGGTCTTTTATTTTACTGTTAATAATTGCTTAATGTCATTAACCACTTATTGCGATAATGTTTTATTAATGTTTATTATACAATAAAAACATTCAAAAAGCATTAATTTCCAATTGTAAACAAACAAACTTCAAAAAAATATCAATTGGAGTGTAAAGTAAATGATGAAGGTGAAATACTTCAAACTGATACTTAAGCAATAGTATAAGACTAAACTTCTAAAATTGATCATTTTGTACCCAGGTTGGTCCAGTGAAAGACGACACACGAACAATCGATGCAATTCTAAATGGAGTGGAGGTCCTAAAGATGAGCAACTCAGTGAACAGCTTAGATGGAGAATTCGGAGTCGATGGACAAAGGGCAGATGGGTCAACAGGTTCCAAAGCAATAGCAGTAGTCGGAATCACAATGGGGTTCGGTGCATTGGCCGGTGTGGCAGCAATGACCGTGAAATGGTACAAAAGACCCCAAGATTGGCGTAGACGTAACAGCTTCTCCTCATGGCTGCTACCCATCCACACAAATCCAACCAGCTTTACCAACACTAAAGGATCCGGGTTCGGGTCCCACAGAAGTGGAATGACGTTTTCATCCACTTTAGGTCTCGGCAGATGCTTCACTCTCGAGGAATTGCAAAATGCAACGAATGACTGGAATGAGAAAGCTGTGGTTGGAGTAGGTGGATTTGGAAACGTGTATTTAGGTGAATTGCTTGATGGTACTAAGGTTGCTGTTAAGAGAGGAAATCCTCAGTCCGAGCAAGGGATTACTGAGTTTCAGACTGAGATTCAGATGTTGTCGAAGTTAAGGCATAGGCATTTGGTTTCACTTATTGGGTATTGTGATGAGAATTCGGAGATGATACTGGTGTATGAGTACATGGCAAATGGACCTTTTAGAGATCATATTTATGGCAAGGACTTACCTGCTTTGACCTGGAAGCAGAGGCTGGAGATTTGCATCGGAGCAGCTCGGGGCCTGCATTATCTTCATACAGGTAACAACTATACCAAGCTGAAAACCAAAGGGAAAAAAAAAAGAATTGCTTTATTTAGATTATTATACATAAGAAGATTAATCAAAAAAAGACTGGAAGATGTATATATGACGAAATGATAGGCACATGAAACCAGGCAAATGTGGTAAAATTAGACACCATGAATTCACAAAAACTAACATTATTACAGTGTTATAGATCAACAATGCCATGATAAACATAAAGATGTAAGTTTACACTTCTCTCCAACCTGGTATAACTACATTTTAACCCTTGCTTAATGATTGAAAAGACTTACTTGTAGAGTTACCCGTTCGATCTTCTTATGAAGTCACCTTTATGATCTCTTCATAAATGAATTCCAAATCTGAGTCCGTTTACTTCTTGTGTATCAGTAGGGACCAATGACTATATTTATGTAGACGTATTGAGATGGAGGTTTCTCCCATCAAGATAACTGTCATGCCCATATAGCTCCTATTGCAAATTCAAAATTTAATAACTGCATTCACGTGTTATAAATGGTATATAAATTCAAACTGACATATTCAGTGCTGTAAATTTAGTGGCTTAGGCTTTGAACAATGTCTTGTTCCCTAAGATATCCCACAAAGATAACTGAAATTTAAGCAAATTCAAAATATATCAAACTTCAAAAGAGGACTTACATTGAAACAAGTGTGTTAGCCTCACTCTAAACAGCTTTTGCAATAGGTTGAGAGGTAAATCTTGAACAAGCATCTCACACTCAACATATTCACAGGTGCGGCAACAGGAATCATCCATCGTGATGTAAAAACAACAAATATCCTCTTAGACGAGAATTTTGTGGCCAAAGTCTCCGACTTTGGTCTTTCAAAAGATGGCCCTGGAATGGGTCAAAATCATGTCAGCACTGCTGTTAAAGGCAGTTTTGGATACCTGGACCCTGAATATTTCCGTCGACAACAACTAACAGACAAATCTGATGTCTACTCTTTTGGAGTTGTGTTATTGGAAACTTTGTGTGCTAGACCAGCCCTCGATCCTGCGCTTCCAAGAGAACAGGTAAAATTTTGATAGTTTTCCTAAATAGGGATTTGCAAGATGATTTCCCTCGTGTATTAATTGGTGACATGGGTCAGGTTATAGCAGAACCAAATAACATACTTTGCTCCAATATTATGTACATGTTTTGCTCTAATATTATGTACAGTAAATGACATGTTTTGCTCAATGTTATGTATAATGATATCAAATTGAAATATAGCTAAGTTATGACTACACTCATCTAGTTTCATCTAGAGTTAGTCCCAAAAAAAAAAGAACTAACCATCTAGCTTATGTAAACAGGTAAATTTAGCAGAATGGGCAATGAAACAGAAAAGAAACGGATCAATTGAAAAGATCATTGATCCAAAATTGGTGGGATGCATAAATATAGATTCAATGAACAAGTATGTTGAGGCTGCCGAAAAGTGTTTAGCAGAATACGGCGTTGACAGACCATCCATGGGTGATGTGTTGTGGAACTTGGAGTATGCCTTGCAGTTGCACGAAGCCAATCCTCCAACTCCACCACCTCAGGTTCGTTTGTCCATCACCTGATTCTAAGTTAATTTTGTCTAGTATGTATAGCTACAAAATTTTAATTAATTTGAATTTTAGGTAATTGTGTATGCCTATGTATGGTAAATTTTGCACATTTGGATTTCATACGAATTAAATTCCATGTCAGGGGGACTCTTCTTCCGACGACAAAGAAAAGGAAGCAGCCAAAGCTCCAGCTGCTACTGAACAAGACAACAACAGTTCATCGACCGAGACAACAACGGTAACAGAGAACTCTAGCACTGCCGTAGCAAACGAGCTCTTTGAACAAATCTCGGGAATGCAAGGGAGGTGATGATAAACTGTTTTGTAAATCGTAAAGACTCTGATAAAGTGTATGTTTCCATCTTTTATGCATCTATATTAACATGTTGGTTATTATTACATTTAGAATGTACTATTTAAATGCATGTTGTCATTACATTTAGAATGTATTATTAGATTTATCCATCTTTTAGAATATCCTATTTATATGACATCAGTACATCTATATTTATATACAAGGAATC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263152.1	0.0e+00	probable receptor-like protein kinase At4g39110, partial
Swissprot	Q9SJT0.1	1.5e-295	Probable receptor-like protein kinase At2g21480
trEMBL	A0A2I0AMC6	0.0e+00	Putative receptor-like protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G39110.1	61.58	0.0	1048		Malectin/receptor-like protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC1G01600	AT4G39110.1	838	291	8	38	855	52	878	61.58	1048
AfisC1G01600	AT2G21480.1	834	302	8	36	855	49	871	60.79	1045
AfisC1G01600	AT5G61350.1	789	303	11	34	793	24	810	57.67	904

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF12819.4	Malectin_like	Domain	46	397	127.1	7.7e-37
PF07714.14	Pkinase_Tyr	Domain	517	711	150.7	3.9e-44

Gene Ontology

Accession	Ontology	Name
GO:0000166	F	nucleotide binding
GO:0005515	F	protein binding
GO:0050832	P	defense response to fungus
GO:0004672	F	protein kinase activity
GO:0009506	C	plasmodesma
GO:0009705	C	plant-type vacuole membrane
GO:0009723	P	response to ethylene
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009791	P	post-embryonic development
GO:0009860	P	pollen tube growth
GO:0009941	C	chloroplast envelope
GO:0010483	P	pollen tube reception
GO:0016324	C	apical plasma membrane
GO:0030308	P	negative regulation of cell growth
GO:0043680	C	filiform apparatus
GO:0046777	P	protein autophosphorylation
GO:0051510	P	regulation of unidimensional cell growth
GO:0051924	P	regulation of calcium ion transport
GO:0080147	P	root hair cell development
GO:0090404	C	pollen tube tip
GO:0097275	P	cellular ammonia homeostasis

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network