Detail information of AfisC1G01656


Location
GeneChrStartEndStrand
AfisC1G01656chr1283595241283608202-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020251513.11.7e-175tubby-like F-box protein 5
SwissprotQ6Z2G9.19.9e-152Tubby-like F-box protein 8
trEMBLA0A5P1FT311.3e-175Tubby-like F-box protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G18280.156.804e-132 468AtTLP2;TLP2tubby like protein 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00646.30F-boxDomain5410534.61.1e-08
PF01167.15TubDomain118406300.56.1e-90

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005515Fprotein binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0005929Ccilium
GO:0006355Pregulation of transcription, DNA-templated
GO:0008081Fphosphoric diester hydrolase activity
GO:0009536Cplastid
GO:0009555Ppollen development
GO:0009620Presponse to fungus
GO:0009651Presponse to salt stress
GO:0009682Pinduced systemic resistance
GO:0009723Presponse to ethylene
GO:0044212Ftranscription regulatory region DNA binding
GO:0035091Fphosphatidylinositol binding
GO:0042542Presponse to hydrogen peroxide
GO:0061512Pprotein localization to cilium
GO:0071470Pcellular response to osmotic stress

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K19600TULP1; tubby-related protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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