Detail information of AfisC1G01835


Location
GeneChrStartEndStrand
AfisC1G01835chr1318638749318652748+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020672048.13.1e-52myb-related protein 305-like
SwissprotQ10MB4.18.4e-39Myb-related protein 2
trEMBLA0A2I0X7W32.2e-52Myb-related protein 305

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G24310.175.966e-47 184ATMYB71;MYB305myb domain protein 305

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00173.25Cyt-b5Domain308269.12.5e-19
PF00249.28Myb_DNA-bindingDomain9814555.25.2e-15
PF00249.28Myb_DNA-bindingDomain15119555.93.2e-15

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135Ftranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0005634Cnucleus
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0009414Presponse to water deprivation
GO:0009416Presponse to light stimulus
GO:0009651Presponse to salt stress
GO:0009723Presponse to ethylene
GO:0009733Presponse to auxin
GO:0009737Presponse to abscisic acid
GO:0009740Pgibberellic acid mediated signaling pathway
GO:0009751Presponse to salicylic acid
GO:0009867Pjasmonic acid mediated signaling pathway
GO:0009909Pregulation of flower development
GO:0010091Ptrichome branching
GO:0010118Pstomatal movement
GO:0044212Ftranscription regulatory region DNA binding
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0046686Presponse to cadmium ion
GO:0043565Fsequence-specific DNA binding
GO:0048629Ptrichome patterning
GO:0048765Proot hair cell differentiation
GO:0080086Pstamen filament development
GO:0080167Presponse to karrikin

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.