Detail information of AfisC1G02037


Location
GeneChrStartEndStrand
AfisC1G02037chr1353482721353483689+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrCBI40214.35.6e-43unnamed protein product, partial
SwissprotQ9LZS0.11.4e-38Trihelix DNA-binding protein PETAL LOSS
trEMBLA0A6A2YZQ25.8e-42Myb-like domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G03680.139.058e-45 177PTLDuplicated homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag214042.t1
Allium fistulosumAfisC1G02037
Allium sativumAsa7G01976.1; Asa7G01977.1
Arabidopsis thalianaAT3G10000.1; AT3G10000.2; AT5G03680.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13837.3Myb_DNA-bind_4Domain1810461.37.8e-17

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009909Pregulation of flower development
GO:0010200Presponse to chitin
GO:0042803Fprotein homodimerization activity
GO:0046621Pnegative regulation of organ growth
GO:0048442Psepal development
GO:0048498Pestablishment of petal orientation
GO:0090428Pperianth development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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