result

Gene information

Detail information of AfisC1G02067

Location

Gene	Chr	Start	End	Strand
AfisC1G02067	chr1	358999026	359006173	+

Sequences

CDS

>AfisC1G02067
ATGGTTGATAAATCAACGCTCCCCGGCTTTCGATTTCACCCAACTGATGCTGAATTGGTATTATACTATTTGAAACGTAAGATTCAAGGAAGACTTTCAAAAAGCCAGGCTGTTATTTCAGAAGTTGACATTTATAAGTTTGCTCCTTGGGAGCTTCCAGAGAAATCTTGTCTTCAAAGCAAAGATCTTGAATGGTACTTCTTCTGCCCTCGAAATAATAAATATTCACATGGAAACAGGACAAACCGTGCTACTGGTATTGGTTACTGGAAACCAACAGGTCAGGACCGCCCTGTCATCAACAAAAAGCAAACTGTAGGAAAGAAGAGAACCCTTGTTTTTCATACAGGCAAGTCACCAGATGGCACTAGGACCGATTGGGTCATGCACGAGTTCAGGATAGAAAAATCAGATGAATTAGTCAAGGCTGGATTCAAACAGGATGCCTATGTCCTATGTAAAGTTTTTGAGAAAAGCGGCCAAGGCCCCAGACCTGGTGAACAGTATGGTGCTCCATTCGACGAAGAGGATTGGGATGATGAAGTTGATACGGTCATCAGCAATGATAATTCTTTACCTAGTGCTCTTGTGATTAACTCTGAACTTTTACAATCTGTAGCTCCACAAGCCGGTGAACTGAACAGTGTGCATCATGTTCAAAATTCTTCTTTGATTCAACCTTCTAGTGTTGGAGCTGAAACATCCTTGCAAGTTCATTTTGAAGTCGGTGAGAGTTCTAGAGCCCGAGAGTTATCTTCCATGCAATGTAATTTGCCGCCTTCCTTTTCTGATGGAGTTTCTCTTGGATCCCTTACTCAAGAAAATGCTCATCTTGTATCCGAGATGCCAGGTTCAGCTCTTCCATTGGAGAATTCTATTCAATACGCAGACTTGGATTTTGACTTGGGCGACCTTGGTGATCTTGACACCTGCATCTACCATCTAATGGAACCAGACGATGGCTTTTCCGTCCTTGAAGTTTTAAGCTGCGTCGATAATCAAGAGCTTCAACATTCTGCAGAGTATGCCAATGGAGATTATTTGACTGTCGACGATATTGCTTCTGAAAATCAGGCGAACGTCATGGAACAGCCGCCTCTTACCAATGTCCAAGATTCGCTAAACGTCACCTCTGGCGACGATTGTTATGACCACATCGCCAACTCTTTGTTGACAAATAATCCCCAGCATACGGAAATGTCTGATGTTTTCCTTCCGTGCATTGCATATCCTGATTGCCAATGCTGCAACTACTTATAG

Protein

Gene

>AfisC1G02067
CTTTATTCCTCATTTTCTGGAGGCGCTTCTTGACGGCCTTTTCCTTGTAAGTTTATTAGATCTCTCAAAATTTTAAACGAAGTTCGTACGAATCTATCTGCTCTATTATCCAAAATCGTTCATCCTAGATACGAATCAATCATATCTAGAGTTCTGTCGCATAACATAGTCCTTTGGATTTATTTATTTTATCTGTTAGTGAATTTTGTTAAGATCATATATATTGGTAGTCGGTGATTCTGAACTATGATCTTATTTTTTTCCCCAGCCGTTGATCTTGTGGGGTTGTAAATATATATTTGCTTTAACTTGCTGCTGTCGATACTATTATTTTAGGGGTTTTGATAAATCTTTTGTTATGGGCATTCAATAGTTAATTTTAACTAGCCGCTTCTGAGCTTTTTCATTGCTCTTCATCACACGCCCGTATTTCATCTCAGATCAAACCCTTACTTTGTTTTCCATATTGTAGTTAGAATAGATCCATTAGCTGCAGTACATATTCTCTGAATATCTTCTTTTGACGTGCTGCTTACTTGCTATACTGATATTGTTTTTCTAGTATATTGACTTATAATATCATATTCCACTTCAATAATTTTAGTTCAATTTTAGAATTTGAGTTATGTTAGTTTGAACAGAGGAAACATTGTCACTGTGCTCTGAGAGTGCCCCCCCCCCCCCCCCCCCCCCCCAAATGGTATAAGGTGTGCTACTGGAGGCCAGCTTGGACTCGTGCCCTTGCTCAGGTGCTATAGGGCCAAATACTAAAATACCCTGGTTTCCAATTTAGTTTATGACAAAATTTAGTTATAAACCTAATTTGTTTAACATAGACAGAAAATAGAACAATCCACTATACAGCAAAAATTATTTCAAATATATCAAGATTTACTCCCTCCCTTCATCTTTCATCATCTACGCTCTTTAAAATTTGAGTCCTATTCACGTAAAAACTCTAAAAATATTCAGTCCTAGATTAAATCAGAATTCAACACCTTTCCAAGCAAAAACAACTCTAATTTTCATAAAATGGATTAAATTTATTTGTAATTGAAAAAGTCAGGTATGAGTGTTGTCTTAGTTGTTATTTAGGATTCTTTGAGAAAAAAATATCGGTTTATTCAAAAGGCTTATTTGATCATTTCTGTTAAACATTTAGGGTTTAGATTGATTATAAAAAGGTCTATTAGCTTTGTAATTAAGATGAAGGACATCTTAGTTATATAGGCTTTTTGACAAATGAATTGAAGTATGTTAAGCAATTCTCGAACTTCTAATATTAATATAATTGGTCTTAATATATAAAATATAAACTTTTTTCCTGAAACGTTATCAATTGTTTTCATGATAAAATTAGTTTTTGTTTCTCAAAAAATTTCATTCACCGCAGATATCTTTTCAATATTTCAATCAACAATAGTGAGTTGAACTTATTAATCTCCTAGCATCTTCAATTTTGCAGGTAATGTTTCAGAACATAGGTAAAACATAATTCAGTTTCTCAATTCAATTGATAATTTCTATTTCTAGTCAAATAGTTGTTTGATATTCATTATTCATTAATAAAGGAACACCTTAGCAAATTGAGATGGTTAATTATCAAGTAGTTAGCTAGTTAAGCCATGTAAATTAGTTATATTATTGTACGAGTTAATAATTGCGAATAGTCATTACCGCTTTAAGTTGGTGTATTTTATGCTTGATTGGCTTCAAACTTTGAAATTAAGAATTTTATTATGCTTAGATTTTCTATGAGGTTGACATTTTATCAGTAGAAACATTAGATATCATATGTGAATGTGTAATTGATTATGAAATAATCTTGATCTAAAATAAATTTTACAACACTTGATGAAAATTATACTTTTAGAATAACATTAAAAGTATTTTTCTAAATGATCAAAAATCGACTCGAGTAGAAACAACTTCGGTTTGATGTGGTAAATCATACAAATAAAGCACGAGTTAATTGTGAACTAATCAGAAATTTGTATCGGTGGTTGACTTTCTGGTTTCTTTGCGATAAAACTTTTTTTTTAACCCTCTTCATGAAAATTCTAGATCCGGCCCCGACTTTTACTCACTTTTGAATGGCTCTATTTGCAAGAGATTATAAAACTAAAGTTTGTTTTTTAACCACATAAGCAGTTAGTGGCCATTAGCAACTGATACCAATATATATAACCGATAATGAAATTACCAGTTTGATTGCTATGACGATTGAACCGCATGAGAACATGTGGTACATCATTGATAATCAAAAGCTCATTGTCGTGATTACTACGCCAGGCTGCTTATATTAACTGACGTCTTTTATTATATTTTGTAATATCTTTTAATTTCATGCAATTTAGAAATAAGAAGTGCAACTGTTAGAGATTATTACGCTGTCTGTTTAAATTGGTACTTAACATATAATTGAAAAGGACAACTCAATGAATTTACATACACATGCTATTTTAATATCTTTCAAAACAATTTTTTGTGTGTTTGGTTATGCAAAATAAAAATAAAGTGACAAAAAGGTATAATGAAAACAATGAGTTATAGTATTGATTCTATCCACATGAAATAATAAAAGCTAACGCATATTACACTCATGAATGGTAGAGATCCTTTACCAAGCACTGTTGTTCATCATCAACTGCAGTTGGAAATATCATTTATCGGTTGCTTTGGTTGGTAGCAGTTTATTTTATTTTTTGTTCTTAAATAGATTGGTATGGTACATAATTTTTGGTATAGCTTGTGGTATCAAATTGAATTCACCTATAGTAAAAATCAAGGCTTGGTTATTTTTAGCATCTGTTTTTGATGTTTTTACAGATATGATCAAAGTCGTCATAGTATAATTTTGATCGGATCTTTCAACCCATCGATTGGTAATTTCAAGCCGTTTCATAAAGTCTTTTTCAACTTTACCTCCTTTAAAATTAAAACACTCTCTACCATTAGGTCAACTGGTTAGTGATGTGACGCTTTAGGCATAGGTTTTAGATGTCATGGGTTCGAACCTTGAGACATCAAACTTAATGTTTTGCTTGAGTAAAATACCACTCTTACTATATAAAAAACATTTTCAAATTTTGTTATGTTCGTAGCGTATTTTGTTTTAGTAGTTATGTATTGCTTGATCCCACATAATACAAAATTACTTCTAATTTCACCCTGCCCGAGGGTTGACCTTTCTATTTTAGATTGGGATTTGAACCTTTGTACCTATTTTGAAGCTAATATAATCTTATTTTAAGTTATAATCATTTTTTTTCTTATTGTGAGTAGGGTTAAGTGCTAAAATGTCATACTTACTGCTTTTACAATAGACTAGAACTTATTGGATTTGGATTAGATACTCAGTGTGTTTATGAATTACACTTGTTTAAATGATTTTTTGGCTATCAATCACATTATCTTTTCTCATTTTTAATCTTTTCTCCGGTTTCTAATTAACAGGAAAGTTCCATAATTTATGATATTTATTGGAGTTCTATTAATATCCCTTACTTACGCCTAACTGGTTGTTTTGTACAGATATTGGCTTGTTCAGCAGATGCCTTTTGACCTCACCAAGGAGTTTCCTCCGTGGTCACTCTGGTGTGACTTCAGGTTATATCATAGTGAACTGTGGTGTTTGTGCAGAGCAGTATATTTTCTTCAAGCCTGAAGAAAGATTCAGACAATGAATTTGATTTCAGTCAAGCTACAAAAATAAAATTTATATTCCCTTTTCCAGAATTTTTTGCTGTTCCCACTGGTATATTTTTTCTCCCATCTGCTCAGGGAAAAGAAAAACAAAACAAAACAATCTTGCTGTTAGCTTTAGTTATAATCCTAAATCCAAAACCTTTTCTTCCTAAAAGATACATTTTTAATTTTTTTTTTTTTCATGGTTGATAAATCAACGCTCCCCGGCTTTCGATTTCACCCAACTGATGCTGAATTGGTATTATACTATTTGAAACGTAAGATTCAAGGAAGACTTTCAAAAAGCCAGGCTGTTATTTCAGAAGTTGACATTTATAAGTTTGCTCCTTGGGAGCTTCCAGGTAGATTACTTTATCTTTATAAATATTTTAGTAATACTATATATTGTAAAATTTCCAACCTTAAGTCGATTCTTCTTTCAACGTATAAACAAATGATAAGTTTTCATCTGAGTTTCTCCAAAGATTACCATATATTTCCTCAAACTGAAAGGTTTGGCACTTGTAATGCTTTCTTGGTGGAGTATGCTTAGTTTGACAATTGTTAGGAGGAATACACACATAAAAAGACTGAAAGTGCATAGGGGATGCGGACCTACTAATGGTTTAGCTAGTTCTATGTCATTATGGCCTTATTTTTTGCCCAGCATTTTGCTACTCATCATTATATTTTTGTTATATTTTTTTTGCAGAGAAATCTTGTCTTCAAAGCAAAGATCTTGAATGGTACTTCTTCTGCCCTCGAAATAATAAATATTCACATGGAAACAGGACAAACCGTGCTACTGGTATTGGTTACTGGAAACCAACAGGTCAGGACCGCCCTGTCATCAACAAAAAGCAAACTGTAGGAAAGAAGAGAACCCTTGTTTTTCATACAGGCAAGTCACCAGATGGCACTAGGACCGATTGGGTCATGCACGAGTTCAGGATAGAAAAATCAGATGAATTAGTCAAGGCTGGATTCAAACAGGTATATGTTGCTATAAGATATTTTTTGCATTGTGTTTTAGATGCTGAATTGCCTGTTCATATACATACCATATAAGTTTTATTTAATCATGGAAAAAAGGAAAACATTGTGCATGGAATTAAATTTAACATCTGAAATAGTTTCCTAATTTCAGTTATTACATATTGGACTGTGTTTTCTATTGTACCACTATAACCCAATTGGTTACGACAAAATTAGTTGTCTGTTCGAAACTTAAAATGTGAGATTTTCATATGCATCTTTCTGTTGGTAATTTATGTTTCTACCTATTTTCTCCTGCTTGTTCAGTCCCTATCAATTTCCTCGCCCTGCTATCTGATGGCTAAACAACCATTTTTTTCTTCTGACTCGTTAAATAAAAATTTGAATACTAACTCATGTATGAAGGACAGTGTATAAACTTTAATTTGTCGTTGACATGTTTGTCATCTCTACGTATGATAAGTTCGTATAATAAGTTCATGTTTCTTCCCTTACATTTTGGCTTACCACAAGCTTGAATACGTGTGCTTTCTTTGTATGACTATTTGTTCTTGTTTTACCTTTCTAGTGATGATTCAAAAAGGTCCTGCGAATTTACATTCACTAGCTAAGCTTTGAACTTTGGCTTCAATTGTATAGAGTCATCATCTTCCTCTACAATGTACAGTCTACATCTAGCTGTCTCAAAATATTAATTAATCTAAGCAACTGTTATCATTACTCTTAATTATTGTCTTCTTTTGTGCTTATATTTCTGTCGATATACCACAAATAAACTCGTTGTACTATAAAGTGTACCAATAATTTTTATTCCTACTTTCAGGATGCCTATGTCCTATGTAAAGTTTTTGAGAAAAGCGGCCAAGGCCCCAGACCTGGTGAACAGTATGGTGCTCCATTCGACGAAGAGGATTGGGATGATGAAGTTGATACGGTCATCAGCAATGATAATTCTTTACCTAGTGCTCTTGTGATTAACTCTGAACTTTTACAATCTGTAGCTCCACAAGCCGGTGAACTGAACAGTGTGCATCATGTTCAAAATTCTTCTTTGATTCAACCTTCTAGTGTTGGAGCTGAAACATCCTTGCAAGTTCATTTTGAAGTCGGTGAGAGTTCTAGAGCCCGAGAGTTATCTTCCATGCAATGTAATTTGCCGCCTTCCTTTTCTGATGGAGTTTCTCTTGGATCCCTTACTCAAGAAAATGCTCATCTTGTATCCGAGGTATGTTGTTTCTAGTTTTTGGATTTACAAGTTAAATATCCCAACATTTAACCACAAATATAATTGGTCGTTTGTGGACATTTTAAGAACAACTTTGGAAGCCTTGTTTTACTTTTCTCTGATTTCACATTTTTTTATCAAATTACAAAATGAAACGAAAGCTAATATATAACATATTGTACGGTTATAATTTATCGTGTATGTAATGCAAAATCCATTTCTTGAAATATCTGATCAGTTGCACCTGTTTTCGTAATTGCTGCTTTTTGCATCGGAGATAGATTGTTTCGAGGACCAGTTCTCCAATGACAGAAATCCACAATCCAATTTTTTTTTCTTTTTACTTCAATGATTGTCAGATTGTGGTACTTGTCTGTACATTTTTTTCTTCCATTCGTCAGTTGAAAAAACATTTTGAATCTTGCCAATAAATTGTTGATCTAGTAGTCTTGAAGTCGAATCCCATTAGCATAATTAATCTATGTTAAAATAAAATAAAATAAATCTTGACTTTAACTTTCTTCAGTTGCAGATGCCAGGTTCAGCTCTTCCATTGGAGAATTCTATTCAATACGCAGACTTGGATTTTGACTTGGGCGACCTTGGTGATCTTGACACCTGCATCTACCATCTAATGGAACCAGACGATGGCTTTTCCGTCCTTGAAGTTTTAAGCTGCGTCGATAATCAAGAGCTTCAACATTCTGCAGAGTATGCCAATGGAGATTATTTGACTGTCGACGATATTGCTTCTGAAAATCAGGCGAACGTCATGGAACAGCCGCCTCTTACCAATGTCCAAGATTCGCTAAACGTCACCTCTGGCGACGATTGTTATGACCACATCGCCAACTCTTTGTTGACAAATAATCCCCAGCATACGGAAATGTCTGATGTTTTCCTTCCGTGCATTGCATATCCTGATTGCCAATGCTGCAACTACTTATAGCATGATATTACCAAACTTGTTAAGAGAGCATCATCTGATTTTGCTTTCAGTATAATTTTACTTTTTTTAGGAATTCTTCTGGTTGGTGACAGTTGTATATATTTTAATGCATCAACCAACCATAACTATTTTTCTCCTCAGTCTGATTTTGTGTGATCAAGTTATGTTAACAATATTTAATCTTAATACTGAATTATTCAATGTTGGTTTTTCTTGAGCATGGAACTTTTTATCTGCTACGATTTACTTCCATTTTAATTCTGTATGCCTCATTGGCTGGATTAGTGTCAG

Functional annotation

Database	accession number	e-value	annotation
nr	AIZ68168.1	3.3e-73	NAC domain-containing protein 74-like isoform X1
Swissprot	Q84K00.2	7.0e-60	Protein NTM1-like 11
trEMBL	A0A0A7LYT8	2.4e-73	NAC domain-containing protein 74-like isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G04410.1	55.38	4e-61	232	anac078;NAC2	NAC domain containing protein 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G02067	AT5G04410.1	195	85	2	5	199	8	200	55.38	4e-61	232
AfisC1G02067	AT5G09330.4	174	67	2	8	181	8	179	60.34	8e-59	224
AfisC1G02067	AT5G09330.3	174	67	2	8	181	8	179	60.34	8e-59	224

Ortholog group

Species	Genes
Allium cepa	g68605.t1
Allium fistulosum	AfisC1G02067
Allium sativum	Asa7G01756.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	8	134	92.1	2.7e-26

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005730	C	nucleolus
GO:0005789	C	endoplasmic reticulum membrane
GO:0008283	P	cell proliferation
GO:0008361	P	regulation of cell size
GO:0009555	P	pollen development
GO:0009611	P	response to wounding
GO:0009620	P	response to fungus
GO:0009626	P	plant-type hypersensitive response
GO:0009819	P	drought recovery
GO:0009744	P	response to sucrose
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009845	P	seed germination
GO:0009910	P	negative regulation of flower development
GO:0009938	P	negative regulation of gibberellic acid mediated signaling pathway
GO:0010114	P	response to red light
GO:0010200	P	response to chitin
GO:0010224	P	response to UV-B
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0031930	P	mitochondria-nucleus signaling pathway
GO:0033619	P	membrane protein proteolysis
GO:0034976	P	response to endoplasmic reticulum stress
GO:0043424	F	protein histidine kinase binding
GO:0048573	P	photoperiodism, flowering
GO:0070301	P	cellular response to hydrogen peroxide
GO:0071333	P	cellular response to glucose stimulus
GO:0071365	P	cellular response to auxin stimulus
GO:0071472	P	cellular response to salt stress
GO:2000377	P	regulation of reactive oxygen species metabolic process
GO:0090602	P	sieve element enucleation
GO:1900057	P	positive regulation of leaf senescence
GO:1900409	P	positive regulation of cellular response to oxidative stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network