result

Gene information

Detail information of AfisC1G02121

Location

Gene	Chr	Start	End	Strand
AfisC1G02121	chr1	367386915	367389886	-

Sequences

CDS

>AfisC1G02121
ATGAACTGCTGCCGTTTTGAATTTGGATTCAGAAGGAAAAGGGACATTTCACAGGCACTAGAGGGTTTCAAAAGCTCTTCATCCAGCAATAATGTTAAGCTTTTCTCTTATAAAGAAATGAAATCTGCAACAGATAATTTTCACCCAAAATATAGGATTGGTCGAGGTGGTTTTGGAATTGTCTACAAGGGAACTCTAAAGGATGGAACATTAGTTGCAATAAAAAAGCTTTCTGCACAATCAAAACAAGGAGCGAAGGAGTTTTTGACTGAAATTGATATCATATCTAATGTTAAGCATCCTAACCTTGTTGAGTTGATTGGTTGCTGTCTTCATGAAAGTGAGCGAATATTAGTATATGAATATGTGGAGAATAGTAGCCTTGATCGAGCATTACTAGGTCATAGAAGCACAAGCGCAGGGTTAAACTGGAGAGAAAGAGCTTCTATTTGTTTGGAGACAGCAAAAGGCCTCAGATTTCTACACGAAGAACACGAGCCATACATTGTCCACAGGGATATAAAAGCCAGCAATATCCTCCTTGACAAAGACTTCTTCCCAAAAATAGGAGATTTTGGATTGGCAAAGCTTTTTCCTGATAATATTACTCATATCAGCACACGAGTCGCTGGCACAACTGGTTATTTGGCCCCTGAATATGCAATGCATGGACAGCTAACTAAAAAAGCTGACATATACAGCTTTGGGGTGGTTGTACTTGAAATCGTTAGTGGTAAAAGTGTTTCAGATATACCAAGGTCGGAAATGGAGAAGTTTCTCTTGGAATGGGCATGGCAACTACGTGAAGAAGGGAGATTGAAAGAGATAGTGGATTCAAGTCTAGCAGAATACCCCGAAGAAGAAGTATTAAGATTTGCAAAAGTTGCACTCTTCTGCACTCAAGCAGCAGCCCAAAGAAGACCTTCAATGTCCCAAGTAGTTGAAATGTTGTCCAAACCAATACGACTGAACGAGAAAGAACTTACTCCTCCGGGCATTGTGCACGTCTCTTCAGGAAAAGATAATTTTGGAAGGAAATCTAACTCTTCAAATTTGAAATTTAAAGCCACAACCTTCACCAACACTTCAAGTCATTTTAGCTCTGATGCCAATGTTACTTTTACTGATATTGTTCCTAGATGA

Protein

Gene

>AfisC1G02121
ATGAACTGCTGCCGTTTTGAATTTGGATTCAGAAGGAAAAGGGACATTTCACAGGCACTAGAGGGTTTCAAAAGTGAGAAATTGATTTTATTAAGTTCATTGTTTAATGTTTAGTGCTAGTATCGCAGCTTAAACATACATAATAAAGAAAATTATTTGCTTGGACAGTTAAAAATCATGTAATTATGCAGTACTTTTAAAATTTTGAAATATAGTTGTATCCTCCCGCCCATAAGTGCAATGGCATCATATATTTTGATTGTTTATTTTTCCATGATCTTCGAAGTTCTACATGCTGCCGCGAATTCCTTGCAAACTTAATTACTTATTGTTATGGCTTTTCATTTTTCATGGTCTTGCTCAGGCTCTTCATCCAGCAATAATGTTAAGCTTTTCTCTTATAAAGAAATGAAATCTGCAACAGATAATTTTCACCCAAAATATAGGATTGGTCGAGGTGGTTTTGGAATTGTCTACAAGGTATGATATTATAGTGATATGACATCTGTCCCTGTTGACAAAGTCACAGGGACTTGTTTAATGCCAATTCCATTCTATTATTTGTTCTCTGTTTTAGGGAACTCTAAAGGATGGAACATTAGTTGCAATAAAAAAGCTTTCTGCACAATCAAAACAAGGAGCGAAGGAGTTTTTGACTGAAATTGATATCATATCTAATGTTAAGCATCCTAACCTTGTTGAGTTGATTGGTTGCTGTCTTCATGAAAGTGAGCGAATATTAGTATATGAATATGTGGAGAATAGTAGCCTTGATCGAGCATTACTAGGTATGTTATAGTACATGTTTTTACCGTTGATTGTATAAGTAGTCAGCAATGACCAAACACTCAGGGTATCACTCTCAGTCCTTCAAGGTTCCAAAACCATAACCTTTGAAACTGATGAAACATACCAAGATGCTTCATTCTTAAGCTGAACTGACATATTCTTTAACAACTATTCTAAAAAAATCAGAAATTTCATGACCGTTTTGAATTAGCACTTTTTGAAACTGAATCGAATTGGTTTTCGTAAGGTGTGAAATTTTGTCTGACTCAACCATCCGTATTAAAATATACCAAATCAAGGCGTGCAATTTTATTTCCCAGCAGGTTTTGATGTTATAAGATGGATATTATTATTTATACCAAGATATTGTTCAAAAGAATAAACCATTAAAAAGATGAGGATAAAGATTACAATGTATGACCAAATTCCCTTGGGTGTTACAAGTTATAAACTATGTTAATTTTGTAGGTCATAGAAGCACAAGCGCAGGGTTAAACTGGAGAGAAAGAGCTTCTATTTGTTTGGAGACAGCAAAAGGCCTCAGATTTCTACACGAAGAACACGAGCCATACATTGTCCACAGGGATATAAAAGCCAGCAATATCCTCCTTGACAAAGACTTCTTCCCAAAAATAGGAGATTTTGGATTGGCAAAGCTTTTTCCTGATAATATTACTCATATCAGCACACGAGTCGCTGGCACAACGTAAGCTTATCTTATCTTATCACTAGCAAAATTAAATGTGGAACATTAAATAGCCAAAATTAGGGAGGGAAAAATAATAATTTCAGTCCAGAGTATTAGTGCTGCTAAATTCTGGCCCATGCATCAGTGCGTATACATTTTTCTCAACATACACATCTAAGCATGGGATGTATGAGTCGTTGAGTTGGTTCTGTAATGTTTCTTGCAATATATCTTATCTGAAGAGGGTTTGTAACATTCAGTAAAAGTGTAAAACTGAAACTAGTCATGTTATCTCTATTATAACGATGTAATATAATCTTCTACCTTTACGGAACTGATGCGTCAATTCGTCACGAAATTGCCAATGTGAGTGAGAAATGCATGGGTCCAGTATAGTAGTCTGTTAAGAGATTTAGCTTATGGGTTTGGTTAGCATTATTTATTTATTGTAAAAAATGTCTCCAAACATGAGGTTATTTCATGCACAAGGGGCAGAACAGTAAAATAATTTCTCACAGTTACAACGATAATTACTTCATGGTTTTGTGGTACATATTTCCCACAACAAGTACAACTGTGGAATTTCAAGTAGCACAATTATCTTAAAATGAAGTGTGATGCCATAAGAATCTAATTCATCATTTAAGGTTCCACTCTAAGTACACTATATTGAAAAATTGTTAGGCTAACAATTGATTATCAATTTTGCAGTGGTTATTTGGCCCCTGAATATGCAATGCATGGACAGCTAACTAAAAAAGCTGACATATACAGCTTTGGGGTGGTTGTACTTGAAATCGTTAGTGGTAAAAGTGTTTCAGATATACCAAGGTCGGAAATGGAGAAGTTTCTCTTGGAATGGGTAAGCCTATTAATCTATTATATTTACTAGTACAGCCTTTTTCACTTGTATTTACTAGTACAGCCTTTTTCACTTGTATTTACTAGTACAGCCTTTTTCAGCTCATTCATCTAATAACGAATTGCTTTGAAAACTGCCCTGTGGGCTTGTGCTACTTGGGAATGCGTGCGTATCAAATAGATGACTTTTTTTTTTAACTTCATAAGGAAATCCTAAACAATAACTGTGCAGTTTGCTGATGATTTGCCTTGAGTATTTATGTATTTACCTTTTCCAAAGGCATGGCAACTACGTGAAGAAGGGAGATTGAAAGAGATAGTGGATTCAAGTCTAGCAGAATACCCCGAAGAAGAAGTATTAAGATTTGCAAAAGTTGCACTCTTCTGCACTCAAGCAGCAGCCCAAAGAAGACCTTCAATGTCCCAAGTAGTTGAAATGTTGTCCAAACCAATACGACTGAACGAGAAAGAACTTACTCCTCCGGGCATTGTGCACGTCTCTTCAGGAAAAGATAATTTTGGAAGGAAATCTAACTCTTCAAATTTGAAATTTAAAGCCACAACCTTCACCAACACTTCAAGTCATTTTAGCTCTGATGCCAATGTTACTTTTACTGATATTGTTCCTAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263588.1	1.4e-158	putative serine/threonine-protein kinase
Swissprot	Q93YN1.1	1.3e-92	Cold-responsive protein kinase 1
trEMBL	A0A5P1FAF9	9.8e-159	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G09010.1	63.52	2e-120	429		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G02121	AT3G09010.1	318	114	2	29	344	28	345	63.52	2e-120	429
AfisC1G02121	AT1G16670.1	308	134	2	30	334	24	331	55.52	3e-98	355
AfisC1G02121	AT1G56120.1	328	153	3	35	362	698	1020	51.83	3e-91	332

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	48	315	170.9	3e-50

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005576	C	extracellular region
GO:0004674	F	protein serine/threonine kinase activity
GO:0004871	F	signal transducer activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0040007	P	growth
GO:0009506	C	plasmodesma
GO:0009861	P	jasmonic acid and ethylene-dependent systemic resistance
GO:0010150	P	leaf senescence
GO:0019901	F	protein kinase binding
GO:0044424	C	intracellular part
GO:0045088	P	regulation of innate immune response
GO:0046777	P	protein autophosphorylation
GO:0051704	P	multi-organism process
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network