Detail information of AfisC1G02131


Location
GeneChrStartEndStrand
AfisC1G02131chr1369202908369211303-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrBAD95987.11.7e-76MADS-box transcription factor AP3
SwissprotQ944S9.21.1e-56Protein SUPERWOMAN1
trEMBLQ53US51.2e-76MADS-box transcription factor AP3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G54340.151.116e-45 177AP3;ATAP3K-box region and MADS-box transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105773.46.6e-21
PF01486.14K-boxFamily8116868.24.7e-19

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0006355Pregulation of transcription, DNA-templated
GO:0010093Pspecification of floral organ identity
GO:0019252Pstarch biosynthetic process
GO:0043068Ppositive regulation of programmed cell death
GO:0048316Pseed development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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