Detail information of AfisC1G02171


Location
GeneChrStartEndStrand
AfisC1G02171chr1377121522377124701+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010919664.11.2e-58LOW QUALITY PROTEIN: transcription termination factor MTEF18, mitochondrial
SwissprotQ9M219.18.6e-41Protein SUPPRESSOR OF HOT1-4 1
trEMBLA0A6I9R3418.9e-59LOW QUALITY PROTEIN: transcription termination factor MTEF18, mitochondrial

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G60400.142.702e-41 166SHOT1Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepa
Allium fistulosumAfisC1G02171
Allium sativumAsa7G02161.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02536.11mTERFFamily1917761.55.8e-17

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0005739Cmitochondrion
GO:0007005Pmitochondrion organization
GO:0010467Pgene expression
GO:0016070PRNA metabolic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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