result

Gene information

Detail information of AfisC1G02260

Location

Gene	Chr	Start	End	Strand
AfisC1G02260	chr1	396275946	396278606	-

Sequences

CDS

Protein

Gene

>AfisC1G02260
ATGGCACATTATATTGCTATTTGCAGTTTAAGCATCTTAATCATATGGCTTATCAAACTATTTCAGCGATGGAGGAATCCAAGATGCAATGGAAAACTGCCACCTGGATCCCTCGGCTTTCCTCTTCTTGGCGAGACATTTCAGTTTTTTGCACCCAGCACCACATTCGACATACATCCTTTCGTAAAAGAGAGGATGAACAGGTATGCCCACTATATTAGTGTTCTTTTATTGTACTTTGATGTCCAGTTCATGATATTACAATGACCCTTATCTGCATACATTATATAAGATTTAGCATGCGTTTCAAATTAATTTACTTGGTTTCAGATATGGGCCTATATTCAAAACAAGCTTAGTTGGGCGACCAATCATTGTATCAACTGATCATGAGCTGAACAATTTTGTGTTTCAACAAGAAGGAAAGTTGTTCCAGAGTTGGTATCCAGATACATTCACTGAAATATTTGGTCGTAACAATGTTGGGGAATTGCATGGCTTTCTATACAAATATTTGAAGAGCTTAGTGCTTAAATTATTTGGTCCTGAAAGCCTGAAAGAAAGGTTACTAAGTGATATTGAGAAGTCGGCTTGCATTAATCTTCGTACCTGGTCACTACAGCCTAGTGTTGATCTCAAAGAAGGAATAGCCACGGTATGCACTATTTTTTTTTCCCAAAGTTGATATTGTCCTTCGAGACTATTGTGACTAAACTTTATTTTTACATTACAGATGATATTCGATCTCACTGCTAAAAAGTTGATTAGTTATGATCCATCAACTTCATCAGAGAATCTCAGACATAATTTTGTTGCTTTCATAAAGGGACTCATCTCTTTTCCAGTAAATATTCCAGGAACAGCTTACAATAAATGTCTACAGGCATGTTGAGTAAAATTTCATCTTGTACTTATAATAATAAATTTTGGTTAATATTGACGTGTAACTTTTTTACAGGGAAGGAGAAAAGCAATGAGGGTTCTTAAACAAATGTTAGCAGAAAGGAAAAGCAGACCAAATAGGCAATGCAATGACTTTTTCGATTATGTTGTTGAAGAACTAAAGAAAGAAAGACCAGTCTTAACAGAATCAGTCGCTTTAGATTTGATGTTTGTACTTCTCTTTGCAAGCTTCGAAACTACTTCATTAGCATTGACATTGGCTATTAAACTAATAGCAGATCATCCTAAAGTTTTGGAGGGACTCACGGTTAGTGATGTTCATATTATCATGTTAGTTCTAGTCAAAATTTATTTATAATCAAAATATTTTTCAGGAAGAGCACGAAGCCATAATAAGGAACCGTGAGGACCCAGAATCTGAAATTACGTGGCAGGAATATAAATCAATGACTTTTACGTTACAGGTACTGAATAAATAACTACAATTAATATGGACTTTTTTTTCCCATGACATATTACTTATGGTTTGCTGCTGTTTGATATAGGTCATCAATGAAACCGCCCGGTTGGCGAATATTGTGCCAGGCATTTTCAGAAAAGTGCTGAAAGAGATCCATGTAAACGGTATAATATATCATATCGCATTTCATGTTCGTGTATAATTATTGTCTACGTATTCCTGACATTTTATACTATGTTTGACAGAATACACAATTCCAGCTGGATGGGGAGTTATGGTTTGCCCTCCAGCTGTTCACTTGAATTCTGAAATATTCGAAGATCCGCTTTCTTTCAATCCATGGAGGTGGAAGGTTAGTTGTGCACATTGAGCTAGCATTTTCATATCTTAATAAATTAGTGATCGAAAAAAAAGAAAAAAAAATCTGCGCTCTTGAATAAACAAGTACAGCAAATTTTATTATGTTAAACACTTGGAATTCCTTATCTTGTGATGGGCAGAACAACTAAGCATAAAAAACCGGATATCCAAGCTGTAAATAATGTTATTCAAATGTCTTTGATTCCTTTCTTGGCCAAGTAACATTGCCAGTTCGTTGTTGTTTCTCTAAGTAACATACTCAAGTGCTAATGATTGTGATATAGGTCAACTCAATGCAAATAATTAATTACCTGCAACGATAATTAGATAATTTAAAATCAATCGTGCGCCTATAATAATATTCAATGAACTGGATACATGCAGAACAAAGCAGAATTAAATGGAGGGTCTAAGAATTTCATGGCATTTGGTGGTGGGATGAGATTTTGTGTAGGAACAGATTTCACTAAACTTCAGATGGCTGTTTTCATCCATTGCTTGGTTACAAAGTATAGGTAATGCCACGATGACATACAAAAACGTTTTTAAAATCAAATGGTTCTAACGAAGTTAGTAAAATTTATGACTATTCTGTTTGAATTTACAGATGGAAAATGATCAAAGGAGGAAATATTATTCGAACTCCGGGATTAGGATTTCCAGACGGCTACCATGTTGAGCTTTTATCAAAAGAATGAAAATACTTCAACATATATGCATAGCAGTGTGATTTTAGATAGAGATATATACACAATAAAATATACAGTGAATTAATCAAGGAAGATGGCATTTGAATACCATTCATTAATCAGGATTCAGTGCATTTTTCCAATATACTTGTAATGGTTTGGTGTTTGTATCTGCTATAATTGAGATGCCAGATTGTATTGGCATGTTTTCAAAGCATACGAACCATGTGGGAATGTACAGTTGTTGTG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020259623.1	1.6e-228	cytochrome P450 87A3-like
Swissprot	Q7XU38.3	1.6e-193	Cytochrome P450 87A3
trEMBL	A0A5P1F5C2	3.7e-224	Cytochrome P450 87A3-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G12740.1	68.17	0.0	671	CYP87A2	cytochrome P450, family 87, subfamily A, polypeptide 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G02260	AT1G12740.1	465	146	2	10	474	8	470	68.17	0.0	671
AfisC1G02260	AT1G12740.2	471	144	3	10	474	8	476	67.73	0.0	666
AfisC1G02260	AT5G48000.5	455	262	4	19	471	21	473	41.54	8e-104	374

Ortholog group

Species	Genes
Allium cepa	g13136.t1
Allium fistulosum	AfisC1G02260
Allium sativum	Asa7G02212.1
Arabidopsis thaliana	AT1G12740.1; AT1G12740.2
Oryza sativa	LOC_Os02g45280.1; LOC_Os04g48170.1; LOC_Os04g48210.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	34	456	211.0	2.5e-62

Gene Ontology

Accession	Ontology	Name
GO:0016021	C	integral component of membrane
GO:0001578	P	microtubule bundle formation
GO:0005506	F	iron ion binding
GO:0055114	P	oxidation-reduction process
GO:0009647	P	skotomorphogenesis
GO:0009687	P	abscisic acid metabolic process
GO:0010268	P	brassinosteroid homeostasis
GO:0048646	P	anatomical structure formation involved in morphogenesis
GO:0016125	P	sterol metabolic process
GO:0016132	P	brassinosteroid biosynthetic process
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0020037	F	heme binding
GO:0030659	C	cytoplasmic vesicle membrane
GO:0032989	P	cellular component morphogenesis
GO:0048366	P	leaf development
GO:0048441	P	petal development
GO:0048443	P	stamen development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network