result

Gene information

Detail information of AfisC1G02402

Location

Gene	Chr	Start	End	Strand
AfisC1G02402	chr1	430110988	430113136	-

Sequences

CDS

>AfisC1G02402
ATGTTCTGGAAAATCCTAAAATTCAGTATATCCCTCTTCTTTCTTGCAAAACTTGCATCTTCAGGTGATTCAAACTTCACTTTCAATGGCTTCAGCAGTTCAAACCTCAAACTTGACGGCACGGCCTCGATCAAAACAAATGGCCTTCTTGAACTTACAAACGCCACTTTGTCAAAAGGCCATGCTTTTCATCCAACTCCTCTCCGCTTCTTATCTGAATCCACCAACAAAACCCTCTCCTTCTCCACCACCTTCATCTTCGCCCTGCGCCCTGAAATTGTCTCCTACCTCGCCGGCAACGGAATCGCCTTCTTCCTCTCCCCCACCACCGATCTCTCCTCCGCCACGGCCATCCAGTACTTGGGCTTATTCAACACCACCAACAACGGCAACCCTGACAACCACATATTCGCCATCGAGCTCGACACCATCCAAAACCCCGAATTCAAAGACATCAATGACAACCACGTCGGAATCGACCTCAACAGCTTGACTTCCACCAAGTCCGCCCCTGCCGGCTACTACGATGACGCCACCGGTGCTTTCAATAACCTAACTCTTATTTCCGGTAAATCAATTCAGGTCTGGATGGATTACAATGGCACCAATATGAAGCTCGATGTCACTCTCTCCTTGGTCCCAATGTCAAAACCTAAAAAACCCCTTTTATCGACTGTTGTGGATCTCTCTAGCGTGCTGCTTGAATCCATGTTTGTAGGACTTTCTTCGGCTACCGGAAGTTATCAGAGGTCGACTTACATACAAGGATGGAGCTTCAATATGAATGGTGCAGCCAAAGCTTTAGATTACTCTAAACTGCCTCCACTGCCTGTACTACCTAAAACCAAAAGCAAAATGGCGCTGTTAGCAATATCTCTACCCATAGCAGCAACTGTGCTATTGCTTTTAACTTCTGTTGCCGTGGTGGTTGTAGTGAGGAGGAGGAAGAAATACACAGAGATAGTTGAGGACTGGGAGCTTGAGTACGGTCCGCACAGATTTTCATATAAAGAACTGTACAAAGCTACAAAGGGATTTGTAAAAGATGGTTTGCTAGGAGCTGGAGGGTTTGGGAGGGTGTATAAAGGCATACTACCCACAACTAAAATGAAGGTTGCAGTGAAGAAAGTATCGCACGAGTCAAGGCAAGGAATGAGGGAATTCGTAGCAGAAATCGTAAGCATTGGCAGGCTCCGCCATAGGAACCTCGTGCAGCTACTAGGCTATTGTAGACGTAGAGGTGAACTCTTATTAGTATATGGGTACATGGCCAATGGAAGCCTTGATAGGTACTTATACTACAAAGATGAACCCACTTTGAATTGGGTTCAAAGGTTTAATGTAATTAAAGGGATTGCATCGGGTCTTTTGTACTTGCATGAGGACTGGGAACAGCTTGTGGTTCATAGAGACATAAAGGCTAGTAATGTGATGCTGGATGAAGGTTACAATGGAAAGCTTGGTGATTTTGGGCTTTCAAGGTTGTACGATCATGGAACGGACCCGTACACAACCCATGTGGTTGGGACAACAGGGTACCTTGCACCGGAGCTAGCAAGAACAGGAAAGGCGACTACTGCAACGGATGTGTTTGCTTTTGGAACATTTTTATTGGAAGTGGTATGTGGAAGGAGGCCGATAGAGCCACATTTAGTGGGAGAAGAGCTCATGTTGATTGGGTGGGTACTTGGAAAATGGCAGAGGGGCACCCTGCTTGAAGCAGTGGATATAAGAATAAGAGGAGAGTATAGCGTGAGTGCGGTTGAGTTGGTGTTGAAGCTGGGGTTAATGTGTACGGATCCAAGGGCGGGGAGTAGGCCCAGGATGAGGGAAATCGTGAAGTATTTGGAAGGAGAACTGGTGCTGCCGGAGTTGCCTGTTGTTTACTCTTGGTTTAATGTTCCGACAACAACGATGCAGAGTTTTGGGTTTAACTGTAATTATTCCAGTGCGTCCATGACTGATATTTCAGCTATATCTCTGTCTGGAGGTCGGTAA

Protein

Gene

>AfisC1G02402
AAAAAAGATGTTCTGGAAAATCCTAAAATTCAGTATATCCCTCTTCTTTCTTGCAAAACTTGCATCTTCAGGTGATTCAAACTTCACTTTCAATGGCTTCAGCAGTTCAAACCTCAAACTTGACGGCACGGCCTCGATCAAAACAAATGGCCTTCTTGAACTTACAAACGCCACTTTGTCAAAAGGCCATGCTTTTCATCCAACTCCTCTCCGCTTCTTATCTGAATCCACCAACAAAACCCTCTCCTTCTCCACCACCTTCATCTTCGCCCTGCGCCCTGAAATTGTCTCCTACCTCGCCGGCAACGGAATCGCCTTCTTCCTCTCCCCCACCACCGATCTCTCCTCCGCCACGGCCATCCAGTACTTGGGCTTATTCAACACCACCAACAACGGCAACCCTGACAACCACATATTCGCCATCGAGCTCGACACCATCCAAAACCCCGAATTCAAAGACATCAATGACAACCACGTCGGAATCGACCTCAACAGCTTGACTTCCACCAAGTCCGCCCCTGCCGGCTACTACGATGACGCCACCGGTGCTTTCAATAACCTAACTCTTATTTCCGGTAAATCAATTCAGGTCTGGATGGATTACAATGGCACCAATATGAAGCTCGATGTCACTCTCTCCTTGGTCCCAATGTCAAAACCTAAAAAACCCCTTTTATCGACTGTTGTGGATCTCTCTAGCGTGCTGCTTGAATCCATGTTTGTAGGACTTTCTTCGGCTACCGGAAGTTATCAGAGGTCGACTTACATACAAGGATGGAGCTTCAATATGAATGGTGCAGCCAAAGCTTTAGATTACTCTAAACTGCCTCCACTGCCTGTACTACCTAAAACCAAAAGCAAAATGGCGCTGTTAGCAATATCTCTACCCATAGCAGCAACTGTGCTATTGCTTTTAACTTCTGTTGCCGTGGTGGTTGTAGTGAGGAGGAGGAAGAAATACACAGAGATAGTTGAGGACTGGGAGCTTGAGTACGGTCCGCACAGATTTTCATATAAAGAACTGTACAAAGCTACAAAGGGATTTGTAAAAGATGGTTTGCTAGGAGCTGGAGGGTTTGGGAGGGTGTATAAAGGCATACTACCCACAACTAAAATGAAGGTTGCAGTGAAGAAAGTATCGCACGAGTCAAGGCAAGGAATGAGGGAATTCGTAGCAGAAATCGTAAGCATTGGCAGGCTCCGCCATAGGAACCTCGTGCAGCTACTAGGCTATTGTAGACGTAGAGGTGAACTCTTATTAGTATATGGGTACATGGCCAATGGAAGCCTTGATAGGTACTTATACTACAAAGATGAACCCACTTTGAATTGGGTTCAAAGGTTTAATGTAATTAAAGGGATTGCATCGGGTCTTTTGTACTTGCATGAGGACTGGGAACAGCTTGTGGTTCATAGAGACATAAAGGCTAGTAATGTGATGCTGGATGAAGGTTACAATGGAAAGCTTGGTGATTTTGGGCTTTCAAGGTTGTACGATCATGGAACGGACCCGTACACAACCCATGTGGTTGGGACAACAGGGTACCTTGCACCGGAGCTAGCAAGAACAGGAAAGGCGACTACTGCAACGGATGTGTTTGCTTTTGGAACATTTTTATTGGAAGTGGTATGTGGAAGGAGGCCGATAGAGCCACATTTAGTGGGAGAAGAGCTCATGTTGATTGGGTGGGTACTTGGAAAATGGCAGAGGGGCACCCTGCTTGAAGCAGTGGATATAAGAATAAGAGGAGAGTATAGCGTGAGTGCGGTTGAGTTGGTGTTGAAGCTGGGGTTAATGTGTACGGATCCAAGGGCGGGGAGTAGGCCCAGGATGAGGGAAATCGTGAAGTATTTGGAAGGAGAACTGGTGCTGCCGGAGTTGCCTGTTGTTTACTCTTGGTTTAATGTTCCGACAACAACGATGCAGAGTTTTGGGTTTAACTGTAATTATTCCAGTGCGTCCATGACTGATATTTCAGCTATATCTCTGTCTGGAGGTCGGTAATATTTGGGTATTGCAGTAAGATATGGGATTGACGATGTTGTGGGTGTACTGTTTCAGTTTTAGCATAATTTGTTTGGGGTTTTATGGAACAAAAGGGGTAGCGTTTGATATTGTTTGGAATGTTTTGTTAATATACTAATTCTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256322.1	1.9e-240	L-type lectin-domain containing receptor kinase IV.1-like
Swissprot	Q7XUN6.2	1.9e-197	Protein SALT INTOLERANCE 2
trEMBL	A0A8B8ZP67	4.4e-223	L-type lectin-domain containing receptor kinase SIT2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	55.23	0.0	707	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC1G02402	AT3G53810.1	650	273	11	18	659	19	658	55.23	707
AfisC1G02402	AT2G37710.1	667	272	13	19	665	20	675	54.57	682
AfisC1G02402	AT4G02410.1	660	290	11	19	665	22	674	53.03	671

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	24	274	270.7	1e-80
PF00069.22	Pkinase	Domain	347	548	154.6	2.9e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0002229	P	defense response to oomycetes
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network