result

Gene information

Detail information of AfisC1G02403

Location

Gene	Chr	Start	End	Strand
AfisC1G02403	chr1	430218130	430219370	-

Sequences

CDS

Protein

Gene

>AfisC1G02403
GTCTAAACAAATTGAATTCGTAGCTCATCCACTTCTGTTGAATAAACTTTAATATTTATTTGACATTTATTTTGTAATTTTCAAGACTAGGCTTACCCTCCATCGGTGAAAAGCATTGCTAGACTTCTTTAGCATTTATTATTCTTTTGATTATTACAAACATCTTGGACTAGTATCACGACCAGCCAATTTGTCCAACCTTCTGAAAAGTCTACAAATATTTTTCAAACTGTCGTATTCAAGCCACGTCTTGAAATAACGCAGAACCCTTCAGTATGAACCTCAGTTATTCAAATAAAGATGCTTTGGAAAATCTTAAAATTCAGTGCATCGCTCTTCTTTCTTGCAAAACTTGCATCTTCAGGTGATTCAAACTTCACTTTCAATGGCTTCAGCAGTTCAAATCTCAAACTAGACGGCACCGCCTCAATCAAAACGAATGGCCTTCTCGCACTTAACAGACGCCGCATCATCCAAAGGCCATGCTTTTTATCCAACTCCTTTCCGCTTCTTATCCAAATCCACCAACAAAACCCTCTCCTTCCCCACCACCTTCATCTTCGCCATCCGCCCCGAAGTTGTCTCCTACCTCGCCAGCAACGGCATCGCCTTCTTCATCTCCCCCACCACTGATCTCTCCTCCGCTGTGGCCATCCAGTACTTGGGCTTATTCAACACCACCAACAACGGCAACCCCGACAACCACATATTTGCAATCGAGCTCGACATTATCCAAAACCCCGAATTCAACGACATCAATGACAAGACACAGGAGCCTGGTGCAGCTTGTAGGCTACTGTAGACGTAGAGGTGAACTCTTATTAGTGTACGAGTACATGGCCAATGGAAGCCTTGATAGGTATTTATACCACAAAGATGAACCCACTTTGAATTGGGTTCAAAGGTTTAATGTAATTAAAGGGATTGCGTCGGGTCTTTTGTACTTGCATGAGGACTGGGAACAGCTTGTGGTACACAGAGACATAAAGGCTAGTAATGTGATGTTGGATGAAGGTTACAATGGAAAGCTTGGTGATTTTGGGCTTTCTAGGTTGTACGATCATGGAACGGACCCGTACACGACTCATGTGGTTGGGACAACGGGGTACCTTGCACCGGAGCTTGCAAGAACGGGAAAGGCAACTACTGCAACGGATGTGTTTGCTTTTGGAACGTTTTTATTGAAAGCTTATGTTGGTAGGGTGGGTACTTGGAAAATGGCACAGGGGTACGTTGCATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256337.1	5.4e-63	L-type lectin-domain containing receptor kinase IV.1-like isoform X3
Swissprot	Q7XUN6.2	2.2e-61	Protein SALT INTOLERANCE 2
trEMBL	A0A4S8IF47	5.1e-63	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G37710.1	73.79	1e-62	236	LecRK-IV.1;RLK	receptor lectin kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G02403	AT3G53810.1	145	40	0	96	240	401	545	72.41	1e-62	236
AfisC1G02403	AT2G37710.1	145	38	0	96	240	401	545	73.79	1e-62	236
AfisC1G02403	AT4G02410.1	165	53	1	78	240	389	553	66.67	3e-61	231

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	93	240	108.9	2.5e-31

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0002229	P	defense response to oomycetes
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005576	C	extracellular region
GO:0004674	F	protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0009555	P	pollen development
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009751	P	response to salicylic acid
GO:0009845	P	seed germination

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network