result

Gene information

Detail information of AfisC1G02407

Location

Gene	Chr	Start	End	Strand
AfisC1G02407	chr1	431226512	431229319	-

Sequences

CDS

>AfisC1G02407
ATGAATCTCAATTCCCCATTGAAAATGTTCTACGAAATTGCAAAACCCCTCTTCTCCCTCTTCTTTCTTCTAAAACTTGCATCTTCAGTTGATTCAGACTTCACTCTCAATGGATTCAACGCCTCAAATCTCAAACTCGACGGCTCCGCCTTAATCAGAACCAACGGCCTTCTTCAACTCACAAACGACACTTTCTCCAAAGGCCATGTCTTTCACCCTTCCCCTCTCCACTTCCTCTCCAAAACCACCAAAAAACCCCTCTCTTTCTCCACCACCTTCGTCTTCGCCATCCTCCCCGAAGTCTCCTACCTCGGCGGCAACGGCATCGCCTTCTTCATCTCTCCCACCAACAATCTCTCCTCCGCTCAGACCAGCCAGTACATGGGTCTCTTCAACGCCACCAACAATGGCAACTCCGCCAACCACATCTTTGCAATCGAGCTGGACACCGTACAAAACCCCGAATTCAACGACATCAACGATAACCATGTCGGAATCGACCTCAACGGCTTGTTCTCCAACAAGTCCTCCCCTGTTGGCTTCTACGATGACGCCACTGGAGCTTTTAATAACGTGAGTCTTATCAACACCCAACCAATTCAAGTCTGGATCGATTATAATGGCACTGATATGAAATTAGACGTCACCGTATCCTTAGTCCCGATGACCAAACCTAAAAAACCCCTTTTATCTGCTATCCTTGATCTCTCTACCATATTGCGTGATACTATGTTTGTTGGGGTTTCTTCCTCTACAGGAGCTTTTCGCACCTCACATTATATACAAGGATGGAGCTTTAGCTTGAATGGTGCAGCAAAAGCTTTAGATTACTCTAACCTGCCTTCGCTCCCTGTAACCAAAACCAAAAACAACACTGTGCTGTTAGCAATATCTCTGCCCATAGCAGTAACCGTGTTGCTGATTCTAACTTCGGTTGCTATCGTGCTTGTAGTGAGAACAAGGAAGGACTACACGGAGTTGCTCGAAGATTGGGAGCGTGAGTACGGTCCTCATAGATTTTCATATAAAGAACTGTACAAAGCTACAAAGGGATTTCAGGACAGTGGTTTACTAGGAACTGGAGGATTCGGTAGAGTATATAAAGGCACACTGCCCACAACTAAAATGAAGGTTGCAGTAAAGAAAATATCACATGAATCAAGGCAGGGAATGAAGGAATTCGTAGCGGAAATCGTAAGCATTGGCAAGCTCCGCCATAGAAATCTCGTGCAGCTACTAGGCTACTGTAGACGGAAAGGTGAACTTCTATTAGTCTATGAGTACATGAGCAATGGAAGCCTTGATAGGTATTTGTACTACCAAGATAGTCCTACTTTAAACTGGTCTCAAAGGTTTAATATTGTAAAAGGGATAGCTTCAGGGCTTCTATACTTGCATGAAGACTGGGAACAGCTTGTGGTACATAGAGACATAAAGGCCAGTAATGTGATGCTGGATGAAGGTTACAATGGAAAGCTCGGTGATTTCGGGCTTTCAAGGCTGTACGATCATGGAACGGACCCGTACACAACGCATGTGGTTGGGACGACAGGGTACCTTGCGCCGGAGCTGGCAAGAACGGGGAAGGCAACTACTGCAACGGATGTGTTTGCTTTTGGAACGTTTTTATTGGAAGTGGTTTGTGGGAGGCGGCCGATAGAGCCACATTTGATAGGAGAAGAGCTTATGTTGGTTGGGTGGGTACTTGGAAAATGGCAGAGGGGTACGTTGCTTGAAGTAGTGGATACAAGAATAAGAGGGGAGTATAGTGTGGGTGAGGTGGAGTTGGTGTTGAAGTTGGGGTTGATGTGCACGAATCCGAGGGCAGGGAACAGGCCAAGGATGAGGGAAGTTGTGAAGTATTTGGAAGGAGAATTGGTGCTGCCGGAGTTGCCTGTTGTTTATTCTAGGTTTACCGTTCCGACTACCGTTAGGAGTTTTGGGTTGAATTATAATGATTCCAGTACATCTGTGTCCGATATTTCGTCTCTGTCTTTGTCCGGGGGCAGGTGA

Protein

Gene

>AfisC1G02407
AAGTGTAAAATGGATTATACCTTTGTTTTATCAATTTTTGGATTGGATGTGGCATTTTCAGTGTTGGAATTTCATTTCAGCAGATATCATAATCATTTTTGACCAGCAATCACAACTGCCCTATTTTTCCCAATCCCCAAGGTACAAAAGGTCTGCAGATAATTTTTCGAATTCTCGTATTCACACCACGTCTTGAAAATCGCAATAACGCTAAACTCTTCTGTATGAATCTCAATTCCCCATTGAAAATGTTCTACGAAATTGCAAAACCCCTCTTCTCCCTCTTCTTTCTTCTAAAACTTGCATCTTCAGTTGATTCAGACTTCACTCTCAATGGATTCAACGCCTCAAATCTCAAACTCGACGGCTCCGCCTTAATCAGAACCAACGGCCTTCTTCAACTCACAAACGACACTTTCTCCAAAGGCCATGTCTTTCACCCTTCCCCTCTCCACTTCCTCTCCAAAACCACCAAAAAACCCCTCTCTTTCTCCACCACCTTCGTCTTCGCCATCCTCCCCGAAGTCTCCTACCTCGGCGGCAACGGCATCGCCTTCTTCATCTCTCCCACCAACAATCTCTCCTCCGCTCAGACCAGCCAGTACATGGGTCTCTTCAACGCCACCAACAATGGCAACTCCGCCAACCACATCTTTGCAATCGAGCTGGACACCGTACAAAACCCCGAATTCAACGACATCAACGATAACCATGTCGGAATCGACCTCAACGGCTTGTTCTCCAACAAGTCCTCCCCTGTTGGCTTCTACGATGACGCCACTGGAGCTTTTAATAACGTGAGTCTTATCAACACCCAACCAATTCAAGTCTGGATCGATTATAATGGCACTGATATGAAATTAGACGTCACCGTATCCTTAGTCCCGATGACCAAACCTAAAAAACCCCTTTTATCTGCTATCCTTGATCTCTCTACCATATTGCGTGATACTATGTTTGTTGGGGTTTCTTCCTCTACAGGAGCTTTTCGCACCTCACATTATATACAAGGATGGAGCTTTAGCTTGAATGGTGCAGCAAAAGCTTTAGATTACTCTAACCTGCCTTCGCTCCCTGTAACCAAAACCAAAAACAACACTGTGCTGTTAGCAATATCTCTGCCCATAGCAGTAACCGTGTTGCTGATTCTAACTTCGGTTGCTATCGTGCTTGTAGTGAGAACAAGGAAGGACTACACGGAGTTGCTCGAAGATTGGGAGCGTGAGTACGGTCCTCATAGATTTTCATATAAAGAACTGTACAAAGCTACAAAGGGATTTCAGGACAGTGGTTTACTAGGAACTGGAGGATTCGGTAGAGTATATAAAGGCACACTGCCCACAACTAAAATGAAGGTTGCAGTAAAGAAAATATCACATGAATCAAGGCAGGGAATGAAGGAATTCGTAGCGGAAATCGTAAGCATTGGCAAGCTCCGCCATAGAAATCTCGTGCAGCTACTAGGCTACTGTAGACGGAAAGGTGAACTTCTATTAGTCTATGAGTACATGAGCAATGGAAGCCTTGATAGGTATTTGTACTACCAAGATAGTCCTACTTTAAACTGGTCTCAAAGGTTTAATATTGTAAAAGGGATAGCTTCAGGGCTTCTATACTTGCATGAAGACTGGGAACAGCTTGTGGTACATAGAGACATAAAGGCCAGTAATGTGATGCTGGATGAAGGTTACAATGGAAAGCTCGGTGATTTCGGGCTTTCAAGGCTGTACGATCATGGAACGGACCCGTACACAACGCATGTGGTTGGGACGACAGGGTACCTTGCGCCGGAGCTGGCAAGAACGGGGAAGGCAACTACTGCAACGGATGTGTTTGCTTTTGGAACGTTTTTATTGGAAGTGGTTTGTGGGAGGCGGCCGATAGAGCCACATTTGATAGGAGAAGAGCTTATGTTGGTTGGGTGGGTACTTGGAAAATGGCAGAGGGGTACGTTGCTTGAAGTAGTGGATACAAGAATAAGAGGGGAGTATAGTGTGGGTGAGGTGGAGTTGGTGTTGAAGTTGGGGTTGATGTGCACGAATCCGAGGGCAGGGAACAGGCCAAGGATGAGGGAAGTTGTGAAGTATTTGGAAGGAGAATTGGTGCTGCCGGAGTTGCCTGTTGTTTATTCTAGGTTTACCGTTCCGACTACCGTTAGGAGTTTTGGGTTGAATTATAATGATTCCAGTACATCTGTGTCCGATATTTCGTCTCTGTCTTTGTCCGGGGGCAGGTGATATATATGCTTGTTGGAGTCGAATATGGTGTAGGAATGAGAGTAGCGTGTATGATATTTCAGTTTATGTTGTAATTTGTTTGGGGTTTTGTCAACCAAAAGGAAAGTGTTTGATGTTGAACAAGAGCTGTGTTGGTAGTATCTTCATTTGGACCATAGAAAACATGAAGTGCCATTTTCTTTTACACTGGTGAAGGGGATGGTGATATTTTGTTTTCAGAATTCCCTATGATTTGGATTATGCCATAAATTCTGGTGGTCTCTATTTGACATAACCCTCCCTACATCGCTAAACCTTACTGGCAAGGAATGAATAGAAGAGCATTACAAAGTGAAAACAAAAAACTATATGTGTATCGCACCTACTTGTTGGATGTTTGTTTACTGGGACAGATCAACCTTGTGGTACCAATTAAAATCAACCAGTAGAAATGCTGCTGATATTTGTTGCTATGCAAACAGACTTATTTAATTATATATTAATTAAGAAATGCAAATATAAAAAGTTGACTTGAATTGAGAGAGGTATTAGTCCCTGCACATCTACTTTAGGTTATTCATCTTTAACGTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256322.1	2.3e-249	L-type lectin-domain containing receptor kinase IV.1-like
Swissprot	Q7XUN6.2	1.8e-203	Protein SALT INTOLERANCE 2
trEMBL	A0A8B8ZUC4	8.4e-230	L-type lectin-domain containing receptor kinase SIT2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G53810.1	55.21	0.0	685	LecRK-IV.2	Concanavalin A-like lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC1G02407	AT3G53810.1	614	267	7	24	631	17	628	55.21	685
AfisC1G02407	AT2G37710.1	649	279	11	37	670	31	675	54.08	674
AfisC1G02407	AT4G29050.1	609	276	7	26	629	20	623	53.04	667

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	32	281	264.2	1.1e-78
PF00069.22	Pkinase	Domain	353	554	162.9	8.3e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0002229	P	defense response to oomycetes
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005576	C	extracellular region
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0030246	F	carbohydrate binding
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009751	P	response to salicylic acid
GO:0046777	P	protein autophosphorylation
GO:0071369	P	cellular response to ethylene stimulus
GO:0071472	P	cellular response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network