result

Gene information

Detail information of AfisC1G02416

Location

Gene	Chr	Start	End	Strand
AfisC1G02416	chr1	434724041	434726563	-

Sequences

CDS

Protein

Gene

>AfisC1G02416
ATGGATGGTTCTTGCTTGCAAAAGGCTTTCAAAGAAGATGATGACAAGGAAGGTATTCTCAGAGCAAGTTCAGGTTATAATATTCATGTTTTAGAAGGTTTTTTTATATCCTATTCACGGTTTGGTGTTCTTTTTTGTTAAAAATGTTCGTTTATGTTCTGTTATTGACTAGAATCTTGATATTTTTTGTTTGAATATAAAGTTACAATCTTTATGAGATGGCAACTAGGATAATTTATGTTGAGATTTGATTTATTTTTTATTTAAGTGATCGAATAGACACTTTTTTGCATATGAAAAGTCTGTGGTTTCATTCTCAAGATGAACAACTATTAATTTTTTGGCTTGTTTTTACGGTAATTTATCAAGACAATGTTAGTATCATTATGTGCCTAGTATACATTCAATGTCTCAGAAAGAAAAAATAGTAATCTCTCTTGGCAGTTCTTTATATGGTAATCTATCTAGTCTAATATTCCCTGAAATTTTTTTATATTTCCAAAAACCTTCCCTGCATAGGGATACATTGAATATGAGTTCGAAATCAGTTAAATAATATGATGATATGTTAAGTCTTCTCAGAGTTAATTCAGGTTATTAAATTTAAGTTCTATAAAGAATTTGCTTTATTTTCTTCCTTTATCAGGAAGTTGGTTCTTTTATTCATTATTTGATGTTTTGTCTTTTGCTCAAAAAAAAAAAAAATGTTTGGACAAATTTTGAAACTAAGCTTAAAAGGAACATATTTCAACTTTAAACTAAGTGCAAACTTATTACAAAATATGCTTTTTTCATCAACTCGGAAATTTGTGCTACCGCACTTTTGAAGTGTGCAAGCACAAATTTGAAAAATAAATAAAACGTGTTTGCGCACTTTTTAAGTGCGTGTGTAAAAATTTGTTTTTAGATTAAAGTGAGCAAGTACCAAATATTAATTTTTGCTTGCGCGCTTTATAAGTGCACAAGTAAAATTTCGATTAGAAAAATTTGTGCTTATTCGGTTTTAAAACAAGCAAGCATAAATATCAAAATAAGACCTAGTTTTGTAATAGCTTTGCATCAGTGTCCAGACTTGGAATAAGTTTGTTTATGAAGCTTAATTGTAAAATTTGTCCTTTATGTTAATTAGTTTATACCTGATATTTATGGTTTGAACATAGTTGCAGTACTCTTGATGGCGTATAACGATGGAACTTGTTCCCTAACAACTATCATGATAATTCACATCAAGACCAAATTTATAGTTAGTTAATGGATTAGATGAATCTAAACTTTTGTGTTAACAATAATGTATAATTTCATTGCCAGATGAACAGTGATTGGTTTTTCTTTTACAGCAATTTATCCACAAAAAATAAAATAAAATGTTAACTTCTTTGTATTGGTGTATAATTCCACTGTCTCAATAAGGAAAATCATTGTTACCTGCCATTTACTTGATGGTAATTTATCAAAAATTTTATGTTAAATCTTAAATTATGCTTCAAAAGAACCCTTTTTCGGGTAGGTCAGAAAGGTGATTATAGCTTAAGAATTCTTTGAATATAGTGTTTATACATATTACTTCCTTCCTGTAACGATATTTCATTTATGTTCTTGTATTCTCTTGTACTCTAGATGGTGAAAAAGAAACAGAAAGTAGTGAATGCGGAAACAGCAACCTCCCGACATTTACTTTGGCTGAATTTGAGGATAATTTAACTGCTGAATCTCTATTGGGAGAAGGAAGATTAGGCCCAGTTTACAAAGGAAAATTGAAAAACGAGGTATGTTCTAATATTTACGACCATCGATCAAATTGAGTAATGTATCTTAGAATCTTATCAATAATCAAGTATACAGCAGGCTGTGGCAATAAGGAAGCTTAATCCAATGGGCCCTCAAAGACCAGATGAATTGGTGAGTGAGGCAAAGAAATTAACTAAGCTTGATCATCCTAACATTGTCAAACTTATTGGATTTTGCATGGAGGGTGAACAAAGACTTCTAATATACGAGTACATGCCACTCGGATCACTCGAATACCATCTATTTAGTATGTATTGCATTTATTATCATTCATAAATATGCATAAAAAGAATAATACTGTAAAGTTTTCTATGTTGTACAGGAAGCAGTTGGGATACGGAGCCACTCGATTGGAATACACGTTTGAAAATTACATTGAATGTCGCTAAAGGAATAAAGCATTTGCATGTAGAGCAAGAACCACCTATTATACATCGAAAATTGAAATGTTCTAACGTTTTTCTCGGGGAAGGGCACAATGCAAAATTATCTGATATTGGATTGGGTGAAAATGATGTATATGGTATGCCTGAATATCCAGAGATGGGTAAATTGACTATAGAATCTGATATTTACGGATTTGGTTTGCTGCTTTTGGAAATAATTGCTGGTAGGAGGGCGCTTGGTAACTCCACTATTATGAAAATGCAAAACCTAGTTGAGTGGGTAAGTCCAGCATTAGTGTACATGCACACTCAGTATGAATTATATGACTGCAGTTATTATTGTATATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_003547039.1	7.6e-55	probable serine/threonine-protein kinase PBL5
Swissprot	Q9LQQ8.1	1.5e-52	Serine/threonine-protein kinase RLCKVII
trEMBL	K7M9J9	5.4e-55	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G07870.1	47.66	7e-55	210		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G02416	AT1G07870.2	235	102	4	35	248	90	324	47.66	6e-55	210
AfisC1G02416	AT1G07870.1	235	102	4	35	248	90	324	47.66	7e-55	210
AfisC1G02416	AT2G28590.1	235	104	4	35	248	85	319	46.81	2e-54	209

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	46	247	112.8	1.5e-32

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0004672	F	protein kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0040007	P	growth
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009941	C	chloroplast envelope
GO:0010183	P	pollen tube guidance
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0046777	P	protein autophosphorylation
GO:0071323	P	cellular response to chitin
GO:0090404	C	pollen tube tip
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network