result

Gene information

Detail information of AfisC1G02462

Location

Gene	Chr	Start	End	Strand
AfisC1G02462	chr1	449156157	449158508	+

Sequences

CDS

>AfisC1G02462
ATGGGTTCTCAGTTCACCGATCCAGAGGTTATGCCTAATTCGAGTTCCGACAGTGAAAATGAGACAGTAGGTGGTGAACATCAAGGAAGCGATCCTCCAACAAATTTAGGACTGGCGATAGCATTCACATTGACCGAGTTAGTTGCTGCAACAAATAATTTCAGTGCTGACTGTCTGCTGGGAGGAGGAGGATTTGGTCAAGTTTATAAAGGAAAATTAGAGTGCAGAGAAGGGGGATATGGTCCAATTCATACTGAAAAGTTAAAGACTGCAGGCTATGTTGTGGCTATAAGGAGGCTTCATCCTATTGTTCCTGAAAGACTTCCAAAGTTTTACAAAGGAGTGACAATGTTAAGCAAGCTATCACTTGATAGCTTTAACCTTAACACAGTTGATTTGATTGGATACTGTATCAATGAGGATCAAAGATTTTTAGTGTATGAGTACATGACAAATGGATCACTTGAAGACCGTCTTTTCAGATGTTGCTCAGATATGAAGCCTCTTGATTGGAGAACACGGATGGAAATAGCCACGGATGTGGCTAATGGATTATATTATTTGCATTTTGAACACAGACCATCCATTATACATCGAAATTTGAAATGCTCGAATATTTTACTCGGGGAGAAGTACAATGCAAAATTATCGGATATCGGGTTGATGGATAAAAGAAATGGATACTGTGTGTGTGAATTTCCCGAGATAGGTAAATTGAGTTATGAGTCAGATATATATGCATTTGGAGTGGTTCTCCTCGAAATTATTACTGGGAAGAGAGCATTTGATAGAACTAGTAATGCGGAAGGAAGAAATCTTGTTGCATGGGCACAACCATTCCTGAAGGACAGAAATATAGTGACTCAAATGGCAGATAAATCACTTGAATGTATCCCAGAATTTCAATTTGAGAAAGCTGCTATTATAGCTAAAGAGTGTTTGCATGATGATCCAAGTAGAAGACCTCAATTAGATAAAATAAAGAAAGAGCTCTCTTCCATCTGCGTAACGATGACCCTATTGCTTGGTTAA

Protein

Gene

>AfisC1G02462
ATGGGTTCTCAGTTCACCGATCCAGAGGTTATGCCTAATTCGAGTTCCGGTAAATTTAAAGATTTTGTGATGCTTTTCATTTTCATAATTTGGGTTTTGTTCCAATCATTTGATTTTAGTTATATTTTTTGTTTATTTGTTTCTGTTATGGTTCAAGAAGCCCATCTATGTTTTTAGTTCTGGATGTAATATGATTATTTGAACATAAAGCTGTAGGTACAGTTCAAATATTAACTAGCTCTTATGATTTTGTTCAATGTTGAATGAAACATCTTATGTGTTTCTTTGTTGACTTTTGCGTGATAAATCTTTTAATCTCATTATATAATGTATAATTTCATGGTGGAGATGAGCATAGATTACTTTCTTGATGGTTCTTTAATTTTATTGTATCAGGCAATTCCTGAAAGATTTATACTTTCAGAACCCTTTGTTGAATAGAGTTTAGAAGAAAGTAGATTGGGAATTAATTTTCATAAAGTAATTTAAGTTCCTGAGCATCAGTTTGATTTTTCTAAATCCCTTGAAGATATTCGTTGCTTATGAAGGAATAGGTTTAAGCTGTACACAATGTTTTTGTTTTTAAAAATTACCTGTGACCATGTGAGTGAATTTTTATAAATCTCGTGTGTAAAACTATAATTTCATTGTGTAAATGAATAAAAACCAACTTTCTTGGTTTCCCTTCTGATAATTTATAATGAAACATATGGATAATCTTTGGTAACAGAAAGAAAGAAAGAAGAAAGGAATTAGGAAGGAAAAGAAAAAAGAAAAAGAAAGAAAGAAAATAAAAGATAACCTTTATTGCAAATCATTTTATCAACTCTCACATGCAAATGGAAACTGTTTCTCAAATATATATGTGTATATGTATGTATGTATATGTCTGTGTGTGTAGTGTACACATGAAAAATAAAGTTCTTTAAAAGGGCCTTGTTTCTTGAATATATCAAGAACATTTTTGCAATTTGTCTTTGGTTTAGAAGATGATTTATAATCTTATGTGCTTCTCCTGTATTTGGTTTCAATAGACAGTGAAAATGAGACAGTAGGTGGTGAACATCAAGGAAGCGATCCTCCAACAAATTTAGGACTGGCGATAGCATTCACATTGACCGAGTTAGTTGCTGCAACAAATAATTTCAGTGCTGACTGTCTGCTGGGAGGAGGAGGATTTGGTCAAGTTTATAAAGGAAAATTAGAGTGCAGAGAAGGGGGATATGGTCCAATTCATACTGAAAAGTTAAAGACTGCAGGCTATGTATATATCAAAATTTAACCTACTCCATCTTATTATGTCGTCAAACTTTGAATTTTATGATAACAACGAAATATTGGTTTATTTTATTAGGTTGTGGCTATAAGGAGGCTTCATCCTATTGTTCCTGAAAGACTTCCAAAGTTTTACAAAGGAGTGACAATGTTAAGCAAGCTATCACTTGATAGCTTTAACCTTAACACAGTTGATTTGATTGGATACTGTATCAATGAGGATCAAAGATTTTTAGTGTATGAGTACATGACAAATGGATCACTTGAAGACCGTCTTTTCAGTATGTATTACATATATATAACTATAAATATGTACATTGTAGAGTGATCATCAAATGGTGATAATTTTTATGTTGACACAGGATGTTGCTCAGATATGAAGCCTCTTGATTGGAGAACACGGATGGAAATAGCCACGGATGTGGCTAATGGATTATATTATTTGCATTTTGAACACAGACCATCCATTATACATCGAAATTTGAAATGCTCGAATATTTTACTCGGGGAGAAGTACAATGCAAAATTATCGGATATCGGGTTGATGGATAAAAGAAATGGATACTGTGTGTGTGAATTTCCCGAGATAGGTAAATTGAGTTATGAGTCAGATATATATGCATTTGGAGTGGTTCTCCTCGAAATTATTACTGGGAAGAGAGCATTTGATAGAACTAGTAATGCGGAAGGAAGAAATCTTGTTGCATGGGTAAGTTTTTTTTTTTTTTTTTTCTTCTTCTGTTTCCTTGCCCTCATTATCTGTATCCTAATGTTTACGTATTTGTTCTGAAACATTTGGAAAGAGCAATAATATCTATCTTGTCTTGTATATGGTATTTCTTCTTATTGATTAATCAGTACTATCATTTTCAGGCACAACCATTCCTGAAGGACAGAAATATAGTGACTCAAATGGCAGATAAATCACTTGAATGTATCCCAGAATTTCAATTTGAGAAAGCTGCTATTATAGCTAAAGAGTGTTTGCATGATGATCCAAGTAGAAGACCTCAATTAGATAAAATAAAGAAAGAGCTCTCTTCCATCTGCGTAACGATGACCCTATTGCTTGGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3771835.1	1.3e-62	Serine/threonine-protein kinase
Swissprot	Q9SFT7.1	1.3e-59	PBS1-like protein 26
trEMBL	A0A6I9QKT1	1.1e-60	probable serine/threonine-protein kinase PBL7

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G18610.1	43.26	2e-61	233		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G02462	AT5G18610.2	319	146	5	33	335	62	361	43.26	2e-61	233
AfisC1G02462	AT5G18610.1	319	146	5	33	335	62	361	43.26	2e-61	233
AfisC1G02462	AT3G07070.1	335	158	7	13	327	34	349	41.19	6e-61	231

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	59	331	109.3	1.8e-31

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0005634	C	nucleus
GO:0009941	C	chloroplast envelope
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0045089	P	positive regulation of innate immune response
GO:0051704	P	multi-organism process
GO:0071323	P	cellular response to chitin
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network