Detail information of AfisC1G02481


Location
GeneChrStartEndStrand
AfisC1G02481chr1452588919452596127-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276266.12.3e-258serine/threonine-protein kinase Nek2-like
SwissprotQ2QMH1.11.1e-220OsNek2
trEMBLA0A5P1EJN81.7e-258Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G04810.158.390.0 655ATNEK2;NEK2NIMA-related kinase 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag419519.t1; g419520.t1
Allium fistulosumAfisC1G02481
Allium sativumAsa7G02455.1
Arabidopsis thalianaAT1G54510.1; AT1G54510.2; AT1G54510.3; AT3G04810.1; AT3G04810.2; AT5G28290.1
Oryza sativaLOC_Os03g43590.1; LOC_Os07g08000.1; LOC_Os12g41180.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain4257214.12e-63

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005515Fprotein binding
GO:0000242Cpericentriolar material
GO:0000278Pmitotic cell cycle
GO:0004702Freceptor signaling protein serine/threonine kinase activity
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0006468Pprotein phosphorylation
GO:0009913Pepidermal cell differentiation
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0030145Fmanganese ion binding
GO:0042995Ccell projection
GO:0043622Pcortical microtubule organization
GO:0055028Ccortical microtubule
GO:1900062Pregulation of replicative cell aging
GO:2000772Pregulation of cellular senescence
GO:2001020Pregulation of response to DNA damage stimulus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08857NEK1_4_5; NIMA (never in mitosis gene a)-related kinase 1/4/5EC:2.7.11.1 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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