Detail information of AfisC1G02576


Location
GeneChrStartEndStrand
AfisC1G02576chr1475096711475098982-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020259993.12.2e-40protein fluG
SwissprotP40619.12.1e-19HMG1/2-like protein
trEMBLA0A5P1F2B91.6e-40GS catalytic domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G53180.163.724e-39 158NodGSglutamate-ammonia ligases;catalytics;glutamate-ammonia ligases

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00505.16HMG_boxDomain368149.53.8e-13
PF00120.21Gln-synt_CDomain13824792.13.1e-26

Gene Ontology
AccessionOntologyName
GO:0000785Cchromatin
GO:0003677FDNA binding
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006333Pchromatin assembly or disassembly
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0006807Pnitrogen compound metabolic process
GO:0030527Fstructural constituent of chromatin

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01915glnA, GLUL; glutamine synthetaseEC:6.3.1.2 Glyoxylate and dicarboxylate metabolismko00630
Nitrogen metabolismko00910
Alanine, aspartate and glutamate metabolismko00250
Arginine biosynthesisko00220
Two-component systemko02020
Necroptosisko04217
Glutamatergic synapseko04724
GABAergic synapseko04727

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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