result

Gene information

Detail information of AfisC1G02669

Location

Gene	Chr	Start	End	Strand
AfisC1G02669	chr1	493139711	493140798	-

Sequences

CDS

Protein

Gene

>AfisC1G02669
CTTTGGTAGAGTTAAAAAGGAGTGTAAAAAACTCTGAGCTTTTGTACAATGACATATGTAGTAGAAAAATATGGAGGGTTGATGATAAGTGAAAATTCACAGAAATCAATTCCAGCTCCATTTTTGATCAAGACTTATCAACTAGTCGAAGACCCATTCACTGATCACATTGTGTCATGGACTGAAGATGAAACTGCATTTGTAGTTTGGAGGCCTCCTGAATTTGCTAGAGATCTTTTGCCTAATTACTTTAAGCATAACAATTTCTCTAGCTTTGTACGGCAGCTCAATACCTATGTAAGTTCTTCAAATTTTTCTAATTACTTTTTCACAATAAGTTCAATTTTTTTGAGTGCTTATTTTATTATGTTCGTAGGGATTTAGAAAAGTTGTCCCTGACAGATGGGAGTTTGCAAACGAGTTCTTTAGAAAAGGGCAAAAACACTTGTTGTCTGAAATTCAAAGGCGAAAAACATTTCAATCTCAACAGATTCATCAGCCTCAAGTACACTACAATCACTATAACCATGAATACGGTCGCCCTTCAAATGATGTTATGGAAATAAGTACTTGGGGCAATATGGATGATGAGCCTCAAATGCCTCCAGTAGTGGTTGATCCTGGTAAGGATGACTATCTCTTGGCCATTTCTGAAGATAATCAAAGGCTGAGAAGGAAGAACTCCCTACTGTTATCAGAACTCACTCACATGAAGAAATTGTACAACGATATCATGTTGTTCATCCAGAACCGTGTTAACACGAAGACTAACTGTAGGTTGATGGAAGTTGGAACTAGTTCTGTTAAGATAACTGAAGAAGAGGAAGAAGAAGAAAGAGAGAATAGTATTAAGTTATTTGGTGTTAAGCTTAATGGCAAGAAAAGAGTTCACCATGAAGGTTGATTGATGATGAGATGGTACGATCTCGATGTAGTTGGTGTTTGGCTAAATTACTGGGAATGAGAGTGCTTGGAATGGTAAGGAGAATTTCTGTGTAGTTAGTAACTAGTGTATGGTTTCATGGTTAATTATGAATTGTAAAATGCCAAATCATTAGAACATTATGTACGGTTTTAGTTAAGAAAAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010922077.1	3.5e-73	heat stress transcription factor B-4b
Swissprot	Q9C635.1	8.9e-58	AtHsf-02
trEMBL	A0A6I9R9F4	2.5e-73	heat stress transcription factor B-4b

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G46264.1	46.77	7e-66	247	AT-HSFB4;HSFB4;SCZ	heat shock transcription factor B4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G02669	AT1G46264.1	310	90	9	12	256	22	321	46.77	7e-66	247
AfisC1G02669	AT4G36990.1	255	120	5	17	253	7	248	40.78	2e-46	182
AfisC1G02669	AT5G62020.1	254	132	3	16	258	15	267	43.31	4e-46	181

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00447.14	HSF_DNA-bind	Family	25	114	108.9	1.3e-31

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0008356	P	asymmetric cell division
GO:0042802	F	identical protein binding
GO:0010200	P	response to chitin
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09419	HSFF; heat shock transcription factor, other eukaryote	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network