result

Gene information

Detail information of AfisC1G02787

Location

Gene	Chr	Start	End	Strand
AfisC1G02787	chr1	513153445	513155414	-

Sequences

CDS

Protein

Gene

>AfisC1G02787
ATGCACAGCTTGCTCCTTTCCTACTTTGACATAAGGGAGAATAATCATCATGCTTTGGGCTTGGGTGAGGATTATCCTCATGCTTTGGGTTTGGGTGAGTGGATCTATCTATATATTTTTTAGTAGAACACAATACAACTACATGCATTTTTACCTAAGTACATCGTTAGAGCCAACTAATCTGAAATCCTACCTCTGCACCATTCTTTATATAAAAATCTGAATTCAAGTTTTGTTCCTACCTCTACATTATTAGTTAACTTATGATTTTGTACCTCTTACATACATAATACATTATTCTATGTGTTTAGATTTATTGTTGTGAGTAGTTAAAAGATTCAATTTTTACTAAGTTCCGTTGAAAATAAGTGGTTATATGTATTTGGTTTTCAAGGTAAGGTTTTAAGTATTGAGCTGTAAAAGAATGCAAGAATAGTTCACATAAATTTGTATGTGCTTTCCTGGAATTTTAACTGGACTTAAAACTCATAGTTTGATAATATACAAAATGTGGACTACCCCAAAGATTATATTATGTAAAACTCATATACTAAAATGTTTATTAACTGATATTTTCATGAAGGGATGTTGAGATAAACTAATAGCTCAATAATACATTACAATTTTGGTTCCCGCTAATGTCAACATGACATTAGCTTTTCTTTATTTCCATAAAATATGTATAAATTATTCTTAAAGAGGCAAGTTTCTTATATTATGACATTTTTGTCCTTCTTAAACTTGCAACTGGCAAGTAGAAATTTTGAAGGATCTTAAATAATTTGAACACTATAGCCCAAAAATGTATATGTTTATTACATTTAAAGTCAATTTTGGACCTTCCTTTTTTTTGCTGTTATTCTTCGTTCTCGTTATTCTCATTTATGTTTCTAAATGTTTAGTTTTTTTAACAATATTAGTTTGCAAAGTTTATGACAATGATCATTCTATACTACTGTCTCAAACATACTTTTCGATTATGTTCTAACAGGTCAAATTTTTAGTTCTTTTGCCGTGATTATTAATTGATGAAGTTCAATGTTATTAATTCTTTGACTTACATATGTGATAAAAGAAATAGACTGAAAAGATATTTTTAGAGCATTTTTCTTTTTTGACTTATAAATTAACTATTTTTTGTGTTCTAGGTATAATTTAACATCATGGGCGTAGAATTTTTCTAAGAGCTGTCTGGTTTCTATTATCATATTTTATATTTAATGTTATTATTATTATTCTAATTCAGTGTAATTTAGATATGAGTTTTGATATTTAGCTAAAAGTTCATAATGTTTTATAGTAGCATTTAATGGAGATACTTATTATGATGTGCTTAACATTCAAAAAGAAATCATGGAGGAAAATCTTGAAAAATTAGAATTCACCGACAAGAATAAATCTGAATTAAACATCGAAACTCTTCTAGCATCTTCTACAGAAATCTTGGGAAAAGGGAAGCTCAGAGCGACATACAAAGCAACTGTGCAAGAATCAGGACCGGTTGTAACTGCAAAAAGATTAGAGAATATGCATGAAGTAAGCAAGAGAGAATTCTTTCACAAAATAAAGCAGCTTGGAGCATTAAAACATCAAAACATTTTGGAAATAATTGCTTATCATTATACAATAGATAAGAAGCCAGTAGTTTATGAGAATGTGGATGGTGGAAGCTTGGCTCAGCTTTTACATGGTAATCTTTCTTTTCCTTTTCTTTTCGCCTTTTTTTGTGTTTATTAAGTACATATATACATATCCTAATACTGTACATGCATGTTTTATAAATAGAAAATAAAGGAGGAGGAAGAATTCCTTTGAACTGGCAAGAAAGGCTAACAATTGCACAAGGAATGGCAAAAGGATTAGTGTATTTACACAACTCTCCTCCCTCTCAAAAAGTTCCACAAGCAAATTTAAAATCATCTAACATCCTCATCGATAAAAACTACAATGCAAAATTAACTGATTATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	CAD1836244.1	6.1e-42	unnamed protein product
Swissprot	Q9SJQ1.1	3.6e-31	Protein PXY/TDR-CORRELATED 1
trEMBL	A0A6P5FDA3	4.4e-42	leucine-rich repeat receptor-like protein kinase PXC1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G36570.1	39.52	2e-33	139	PXC1	Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G02787	AT2G36570.1	167	100	1	56	222	340	505	39.52	2e-33	139
AfisC1G02787	AT5G16590.1	166	91	3	57	222	326	487	42.77	2e-32	135
AfisC1G02787	AT5G35390.1	167	95	1	56	222	339	504	42.51	4e-32	134

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	77	222	60.4	1.6e-16

Gene Ontology

Accession	Ontology	Name
GO:0000166	F	nucleotide binding
GO:0006952	P	defense response
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0005496	F	steroid binding
GO:0005768	C	endosome
GO:0005774	C	vacuolar membrane
GO:0009505	C	plant-type cell wall
GO:0009506	C	plasmodesma
GO:0009553	P	embryo sac development
GO:0009729	P	detection of brassinosteroid stimulus
GO:0009737	P	response to abscisic acid
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0009834	P	plant-type secondary cell wall biogenesis
GO:0009911	P	positive regulation of flower development
GO:0010103	P	stomatal complex morphogenesis
GO:0010224	P	response to UV-B
GO:0010268	P	brassinosteroid homeostasis
GO:0010584	P	pollen exine formation
GO:0016310	P	phosphorylation
GO:0042803	F	protein homodimerization activity
GO:0043234	C	protein complex
GO:0046982	F	protein heterodimerization activity
GO:0048366	P	leaf development
GO:0048481	P	plant ovule development
GO:0048657	P	anther wall tapetum cell differentiation
GO:0060548	P	negative regulation of cell death
GO:1900140	P	regulation of seedling development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network