result

Gene information

Detail information of AfisC1G03109

Location

Gene	Chr	Start	End	Strand
AfisC1G03109	chr1	573923507	573926704	-

Sequences

CDS

>AfisC1G03109
ATGAGTTGGTTGATCTCTTGCTTTTCCGAAAGGAAAAATCAACTAAGCGCAGACGAAGAAATATCAGGCATTGAAAATGTGAAAATTTTCACTTATAAGGAACTGAAAATTGCCACAAGAGATTTTTCCAATAAAATAGGGGAAGGAGGTTTTGGACCTGTTTACAAGGGAACACTGAAAGATGGAACAGCAATTGCTATAAAGACACTATCTAAGGAGTCCACACAGGGCAAAAGAGAGTTCTTGACAGAGATAAAAGTAATCTCCAATGTAAACCACAAGAATCTTGCTGGATTATATGGTTGCTGTGTAGAAAATGATCATAGAATACTGGTCTATGAATATATCGAGAACAATAGCCTAGCTCAAACTCTTCTTGGTGCGAACCGTAGTGGTATTAGGTTCAGTTGGAAAGTAAGAAGTAAAATATGCATTGGAATAGCTCAAGGGCTTGTGTTTCTCCATGAGGAAGTCAAACCACATATAGTACATCGTGATATCAAAGCAAGCAATATTCTTCTTGATAAGGATCTAAACCCTAAAATTTCAGATTTTGGGCTAGCTAAGCTGCTACCTCCGAATGCAACCCATATCAGCACCCGTGTTGCTGGAACAATAGGGTACTTGGCTCCCGAATATGCTGTAAGGGGACAGGTGACAAGGAAATCCGATGTCTATGGCTTTGGTGTTCTTTTACTGGAGATAGTGAGTGGACGATGCAACTCTAATAGCAGATTGCCTCCTGATGAACAGTTTCTCCTTGAAAGGACGTGGCTGCTGTACGAACAAGGCAAACTTTCAAGCATCATAGACACTGAAATAACTGATGACTCTGACATTGAAGAGGCATGTAAATTTGTAAAAGTTGGTCTTTTGTGCACACAAGATGGCTCTAAGCTTCGGCCATCGATGTCAAAAGCTCTCAAAATGTTGAAAGGCGAGGTTGATGTGGACTTTGAGAAAATTACTAAGCCTGGTTTGATAACTGATTTCATGCATCTTAAAATAAAAGGCAGTGATAAGTTGAATGACATGAAAAACACTGCATCCACTTCATCATCTCTTGAAAATGGTTAA

Protein

Gene

>AfisC1G03109
AAGATCTTCATTTATGTCATTAAACAATTCAAAAAATTCTGCTCTCTTATCTTCACCTAAATCAGAAGCCTTAGCTCCATTAATCTGGCATGGGGCGCGTCTCATTTTAGCTCCATTTAGCCCTTTCCAGGTAATTTATTTTCTGCGTATCCTCCTTACCATTAAATTTACACAAAATGATGCGATTCTATTGACCGTATTGATCCCGTGCTGGCCGTTGGATCAGTTAAAGGAGCTATAGTGTTCCGATTGCTAGATTTAGGATCATTGCGTGATTCTTGGTTTATCATTTGTGTAGTTTGTTGAGTATTTACATGATTAAAGCTATATATATATATATATATATATATATATATATATATATTtTGGGTTTTAGCTATAGACAAATACACCATTTTATTCAGTTCTGTAATTTTTGTTGCATACTGTTAGAATATAAGAGATTTAGTAAACCCTTATTTAATATTGAAGAGACTGAATTCTGCAATTACGGTCCTTACATAAGCTTTAGTGCAAATGGTGTTTGAAAAAACGTCTTTTTAATAAATTGTTACTAAATACTGGATTTTAGCTTTTATAAATTTTTTACTAGAGTCTAGAGGTATATGTAAGGGCATTTGTTGCAGAGGGTCAAGAGGAGAGGAGAGGAGAGAAAAGCGTGGAAAACTCCAACCCTTCCAACGGTTCATCTAGATTATTTTTTGGTATTTTTTCGGATTCTTTTATACATAAAGGTTGGCTACACCTCAAATACTCTTGATTTCAACCACATATTTCGATTTAAATAATTATAACTTATATTTTGTGACTTCATTCTATTATTTAAACAACAACAACAACAAAAAGTGGGAATTGACCCACTTTTGCACTATCATCAACGGTTGGAGATGCCCTAAGAAGTGACACAGATTCATTTACATCATGTTATTTGTTAATTAATATAATGTTGTACCGAAGCTATTAGTCTGAAAGGATGGTGCGGTGTTGATGTTGCCACAAATATTACAATAAAGCCTAAACAAACAGTACAAAAACCAGCACGATATATGAACCATTTCAGCAAAGATAAAAGACATGAGCACGAATAGATAGTGGAGCATATTGGCAGAAGGCAGTTACATGTTTTACCTTTTATAGCATCTTTGATTAAATAGGTATATGTTGCTATATTTTGTGCATGACCAGAAATGGTCCTTTATTTTCATTAGTCCAGCTGTCTTGTTTGTTACAAAAGTTAATACAACGAAATGAGAAAGAATTTGCAGGCAGAAAAAAATGAAAACTTATCTTTCCTCTTCACTGTTTCTTCTTTCTCTCCTCTAAGTCTTCTCTGTATCTCATGCTTTCCTCCACTTTCTCATTCTTCTATTCTAAATCCGTATCATTTCTGGTCATGCACAGAAATATTTGGACCTCAGTTGAAATATTTGGTGATCTTAGGCTCTTTAATTTCGCAGATACTTGATTGTTGATATTCAGCACTCGATCACACTCTTCAGTTCATAGTAATGAGTTGGTTGATCTCTTGCTTTTCCGAAAGGAAAAATCAACTAAGCGCAGACGAAGGTAGAGCTTATAAAATATGTAGGGAAAACCAATAAATTTTAACAGTTATATGATTTTCTATATTTACCTGTTGGTCATTTTCAGAAATATCAGGCATTGAAAATGTGAAAATTTTCACTTATAAGGAACTGAAAATTGCCACAAGAGATTTTTCCAATAAAATAGGGGAAGGAGGTTTTGGACCTGTTTACAAGGTAATGCTATATATCAAGCATGAATTTGAAAACAGTAAAATTAAAAACCGAATTTTCAGTGGATATACTTGTTTAGGGAACACTGAAAGATGGAACAGCAATTGCTATAAAGACACTATCTAAGGAGTCCACACAGGGCAAAAGAGAGTTCTTGACAGAGATAAAAGTAATCTCCAATGTAAACCACAAGAATCTTGCTGGATTATATGGTTGCTGTGTAGAAAATGATCATAGAATACTGGTCTATGAATATATCGAGAACAATAGCCTAGCTCAAACTCTTCTTGGTAAAAAATTTCTACTTGTGTTTAACTTATCATCTCTCTTCTTATATTGGTAAAATATTCATATCCTACAGTGTTTTTCGCCGCACATCGTGCTACCACATCAAAATGTTTGTGAGATATAATTAAGTTTCAGTTTACTTACAATCTTCAATTAATATTTGTAGGTGCGAACCGTAGTGGTATTAGGTTCAGTTGGAAAGTAAGAAGTAAAATATGCATTGGAATAGCTCAAGGGCTTGTGTTTCTCCATGAGGAAGTCAAACCACATATAGTACATCGTGATATCAAAGCAAGCAATATTCTTCTTGATAAGGATCTAAACCCTAAAATTTCAGATTTTGGGCTAGCTAAGCTGCTACCTCCGAATGCAACCCATATCAGCACCCGTGTTGCTGGAACAATGTGAGTTTAACCTTTCTTATGCAATCATATTTTGAAAGTTATTTCTTCTTTTGGTGCTTAGCTTGTATGGCTGTTTTCGATAGAGGGTACTTGGCTCCCGAATATGCTGTAAGGGGACAGGTGACAAGGAAATCCGATGTCTATGGCTTTGGTGTTCTTTTACTGGAGATAGTGAGTGGACGATGCAACTCTAATAGCAGATTGCCTCCTGATGAACAGTTTCTCCTTGAAAGGACGTGGCTGCTGTACGAACAAGGCAAACTTTCAAGCATCATAGACACTGAAATAACTGATGACTCTGACATTGAAGAGGCATGTAAATTTGTAAAAGTTGGTCTTTTGTGCACACAAGATGGCTCTAAGCTTCGGCCATCGATGTCAAAAGCTCTCAAAATGTTGAAAGGCGAGGTTGATGTGGACTTTGAGAAAATTACTAAGCCTGGTTTGATAACTGATTTCATGCATCTTAAAATAAAAGGCAGTGATAAGTTGAATGACATGAAAAACACTGCATCCACTTCATCATCTCTTGAAAATGGTTAATGCTTCCTCCAATAAGAGACGGCTAAGTACGGTTTAAGCGAAATACTCTTTCAACTTTTATTTTGACCCATTTCATATTATTTGAGCCTGTTGGTTTTCCTTTAGGATTTGATTTATTTGTATGGTTCTAGTTGTAGATGGTTCCAAAAACCATGTAGTTATGCGTAAGCATAGTTTATATTATATGATTTATTTAAGACGGTCAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269570.1	1.5e-138	LOW QUALITY PROTEIN: putative serine/threonine-protein kinase
Swissprot	Q93YN1.1	2.3e-128	Cold-responsive protein kinase 1
trEMBL	A0A5P1ELQ0	1.1e-138	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G16670.1	64.81	1e-132	469		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G03109	AT1G16670.1	341	113	4	2	338	4	341	64.81	1e-132	469
AfisC1G03109	AT1G56140.1	331	148	5	4	331	654	980	53.17	2e-96	349
AfisC1G03109	AT1G56130.1	350	160	6	10	355	661	1006	52.00	2e-96	349

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	43	309	162.7	9.5e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005576	C	extracellular region
GO:0004674	F	protein serine/threonine kinase activity
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0007154	P	cell communication
GO:0009506	C	plasmodesma
GO:0009861	P	jasmonic acid and ethylene-dependent systemic resistance
GO:0010150	P	leaf senescence
GO:0010193	P	response to ozone
GO:0045088	P	regulation of innate immune response
GO:0046777	P	protein autophosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network