result

Gene information

Detail information of AfisC1G03392

Location

Gene	Chr	Start	End	Strand
AfisC1G03392	chr1	632662372	632665835	-

Sequences

CDS

>AfisC1G03392
ATGGGAAACTGTATGAAGAAATCTCAGACTGCTCAAATTTCTAAATCCTCTTCAGATCCTTCAAAAAATACAAATGGACATACAAACTCTTATACTGCTCCGTCCACTGTGACATCATGCTCAACTGCTTCAACTCTTACTATTCCTTCTTCTACTCAAGGAAGTGCATACGATTGTCCGCCTATGCCACGCACAGAGAAGGAAATATTATCGTCTCCAGGTTTGAAGGCTTTCACATTTAATGAGCTTAAAAGTGCTACAAGAAACTTTAGGCCTGATAGTCTTATTGGAGAAGGAGGATTTGGACATGTTTACAAAGGATGGATTGATGAACAAACATTTACAGCTACCAAGCGTGGACTTGGAATGCCTGTTGCTGTTAAGAGACTTAAATCTGATTGTTTTCAAGGCCACAACGAATGGTTGATGGAGGTTGATTTTCTAGGTAAACTCGAACATCCCAATATAGTAAAGCTAATTGGATTCTGTACGGAAGGGGATAATAGGCTTTTAGTTTATGAATATATGCCTAAAGGGAGTCTGGAGAACCATCTGTTTAGAGGAGGTCCTCAAACACTTCCTTGGGCAACCAGATTAGATATAGCAATTGGTGCCGCCAGGGGAATTGCATTTCTTCATGATTCTGAAAGCCAAGTTATATATCGAGATGTCAAGTCTTCCAATATACTTCTTGATTCGGACTATAGTGTGAGACTATCAGATTTTGGCTTGGCTAAAGCAGGTCCTACAGGCGAAAAGACACATGTCAGTACACGTGTGGTCGGTACGCAGGGATATGCTGCACCAGAATATATTGCAACAGGGCGCCTCACTGCAATGAATGACGTATATAGCTTCGGGGTTGTACTGCTAGAACTTCTATCAGGGAACAGAGCTTACATGAAGTCAAAATCAGGTCAAGAGCACTATCTTGTGGATTGGGCAAATCCTTTTCTTACGGATAGAAGAAACATATTTCGGATAATGGACTCCAAATTAGAAGGTAAATACCCGAAAAGGGGAGTTTATGGGGTTGCCACACTTGCATTACAGTGCATTAACAGTGACGCTAGGCAAAGGCCACGCATGTCGCAAGTATTAGAGAAGTTGGAGCAGATTCGAAGTTTGAAAAAAGGTTTGGAGGTTGAGAATGAAACACCTTCAAATGGTCCTATAAAATCATCAAAGCATCATGTAAGTGAAAAGTCATTTGCTTTACCATTGCCGTCACCTTCACTTGCATTAAACAGAACAGCCAATTGA

Protein

Gene

>AfisC1G03392
AAAACCTGTTAGTTCTCAAAAACGAGTAGTTCTTCAAATTAACTGGGACCCCCAATAACAATTTTCTTCGCCCTTTCCTCCTGATTTCATATTAGATGAGCAATTGATATAAAAACAAGTTAGTCAAATGATCCATTTTGACTAAAATGAATTGAATAACAATCAATAACATCCATTAACTGATATTTGATTTTTCAAATATACCAGAGAGGAAAGAGGAGAGGAGAGGAAAGGAAATAATGGGAAACTGTATGAAGAAATCTCAGACTGCTCAAATTTCTAAATCCTCTTCAGGTAAATAAATTTTCTTTCTTCCCACTTTTGTACTAACACCCCCAAAGTTTGGTTCTTTTATAACATTTGGTTACATATACTTGATTGTTGGTGTTAACTTTTGGAAAAAGTTGAAATATAGCTCCAACTCGTATGGAAAAATTAATTTCTCTTTTCTATCCCCTTATTAAAGCAGTTAACTACAGAAGTACCCTATCTTTTCACCAATTTATGTTGCTTGCTTTATGAAAACCATCAATGTAACAATAGCTGAATTGGCTCAATATTAACCTGCATTGATCATTGAGCTACCTGATTTTAACAGATAAGTGCTAAACTGTGCTAAGATCTCTTAATCTGAAAGTGGTAGAATTCAAGAAATTATTGTGGAAGTTAACAGTTTTTTATTCTTTTCATGTGTTCAATGCAAAATCTGCCCTTATATCAAATGTTGCATAAAAAAAGAAAGTCTTTGTTCAATAAACAAGCATCATAACACTAAATATTGCACTTGTTTAGATCATCATACTCCAATGGCCACATTGTATTTGACATAAATCCGCCTATGTTCATGCCATAGCAAATAAATGATCTTAATGCTATTAGTTATTTTGTTCTCCAATTTCTCAGTGCTAACTAAATTTTTATCTGTCTATAAACAGATCCTTCAAAAAATACAAATGGACATACAAACTCTTATACTGCTCCGTCCACTGTGACATCATGCTCAACTGCTTCAACTCTTACTATTCCTTCTTCTACTCAAGGAAGTGCATACGATTGTCCGCCTATGCCACGCACAGAGAAGGAAATATTATCGTCTCCAGGTTTGAAGGCTTTCACATTTAATGAGCTTAAAAGTGCTACAAGAAACTTTAGGCCTGATAGTCTTATTGGAGAAGGAGGATTTGGACATGTTTACAAAGGATGGATTGATGAACAAACATTTACAGCTACCAAGCGTGGACTTGGAATGCCTGTTGCTGTTAAGAGACTTAAATCTGATTGTTTTCAAGGCCACAACGAATGGTTGGTGAGTAGCTTCATTATGCTATCATTACTTGATCTCCATTAAAATTCAAATTTTGATTCTATCGCTTTTTCACTGAACTTGGATTGTTGAATATGTTAGTATCATAAGGAAGTGTATCAGTGATTTAACATTTATACTGAACAGAGTCGTCTTTTATATAAGCTTGTGATCGTTTACTATTGATCACTGGTGCCTGATGTATCTGTAAATTTATTTATCTGAAAATAATTGCAGATGGAGGTTGATTTTCTAGGTAAACTCGAACATCCCAATATAGTAAAGCTAATTGGATTCTGTACGGAAGGGGATAATAGGCTTTTAGTTTATGAATATATGCCTAAAGGGAGTCTGGAGAACCATCTGTTTAGAGGTAAATAAATACTGATCATGTATAAATATGTATGTATATATATATATATATATATATATTCTATATTTTAAGACAAGAAAAGAGAAGAAAAAAGTAATAAAGAAACTATATTTCAAGAAAGTGAAGAATAATCATGCATTATCAGTATTCCAATAATTGTTATTGTGTGCACCTCATTTAAAGTGTGTGCATAAATTGACACATTGTGAACCAAGTGCCTACAATTTTTGGGCATAAATTTACATTATCTACATTTATCAGGAGGTCCTCAAACACTTCCTTGGGCAACCAGATTAGATATAGCAATTGGTGCCGCCAGGGGAATTGCATTTCTTCATGATTCTGAAAGCCAAGTTATATATCGAGATGTCAAGTCTTCCAATATACTTCTTGATTCGGTAGGACATTATAAAAGATTGTTAAAATTTGAAGTATATAAAACCCCTTGTTCACATCATAAATTGTGTAAATTACAAATGCAGGACTATAGTGTGAGACTATCAGATTTTGGCTTGGCTAAAGCAGGTCCTACAGGCGAAAAGACACATGTCAGTACACGTGTGGTCGGTACGCAGGGATATGCTGCACCAGAATATATTGCAACAGGTACACGCCTCTTCATAGCCTAAAAATGATAAATGTACACCCTTAATTTAACACATGAAATGTACATATAGGGCGCCTCACTGCAATGAATGACGTATATAGCTTCGGGGTTGTACTGCTAGAACTTCTATCAGGGAACAGAGCTTACATGAAGTCAAAATCAGGTCAAGAGCACTATCTTGTGGATTGGGCAAATCCTTTTCTTACGGATAGAAGAAACATATTTCGGATAATGGACTCCAAATTAGAAGGTAAATACCCGAAAAGGGGAGTTTATGGGGTTGCCACACTTGCATTACAGTGCATTAACAGTGACGCTAGGCAAAGGCCACGCATGTCGCAAGTATTAGAGAAGTTGGAGCAGATTCGAAGTTTGAAAAAAGGTTTGGAGGTTGAGAATGAAACACCTTCAAATGGTCCTATAAAATCATCAAAGCATCATGTAAGTGAAAAGTCATTTGCTTTACCATTGCCGTCACCTTCACTTGCATTAAACAGAACAGCCAATTGAGCGCTGTAAAAATTTGGTAAAGCACTCTGATTTCTTGTAATTGGCAATGTAAAGTAGGCTTTGTATGTACGCGGGGACTGTTTGCCTCCTCTTATACTTCTGTTTGCTTAGTTAAAAGGTTAAAAGATGTCTACTTCCTTCTTTTATTTCTTTAATCTTGGTGTTTTAATCTAATAATTTTGTTTTTTATGTGTGTTTCTTATAACGTGCTATTAAATGAACCGTATTATTTTCATTTAAAAACAATTTTTAACCATTAAAGCATATTTCATCCACTTGATACATGTTCATTCAGCAATGTAATACTGGGAGATATGGAAATCGTTTGGTCAAACGTAGAGGTAAAGACCTTTCTCTCATCATTTCATTTTACATGTCTTCATGTGCCAACATAATCAAAGCATATGTTATTTGTGAAATAATAAATTAGCAGGATCCACCCTGAAAATTGATGAAGTAGATTTCATGGATAAGAGGTACACTAAATTGTAGATGGAGATCAGTTACTTGTATCACTTTTAGAGCGATGAGATTCACATGTGCAACCATCTGCATCCTTCTCTTATTTTGTAAGAAAAATAGTATGAGAAACGAGGAAGAGTAAGATAGAAAACTCTCTGTTTTGATACAGATTTGCTATATTATTATTATTTTGTACACAGTGCCGGCCC

Functional annotation

Database	accession number	e-value	annotation
nr	KAF5939063.1	1.1e-140	hypothetical protein HYC85_023322
Swissprot	O49840.1	3.7e-138	Protein kinase 2B
trEMBL	A0A7J7GE77	7.8e-141	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G02800.1	61.14	1e-140	496	APK2B;Kin2	protein kinase 2B

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G03392	AT2G02800.2	404	148	3	1	403	1	396	61.14	1e-140	496
AfisC1G03392	AT2G02800.1	404	148	3	1	403	1	396	61.14	1e-140	496
AfisC1G03392	AT1G14370.1	378	149	2	1	378	1	374	59.52	1e-132	469

Ortholog group

Species	Genes
Allium cepa	g174361.t1
Allium fistulosum	AfisC1G03392
Allium sativum	Asa7G05603.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	94	370	162.9	7.4e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005730	C	nucleolus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009507	C	chloroplast
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network