result

Gene information

Detail information of AfisC1G03413

Location

Gene	Chr	Start	End	Strand
AfisC1G03413	chr1	636204688	636205861	-

Sequences

CDS

Protein

Gene

>AfisC1G03413
ATGGTGACTAGCGGAGAAAAAGAGTGGTATTTTTACTGTCCAAGAGACCGTAAATATAGAAACAGTGCACGCCCAAACAGAGTCACCGAAGCTGGATTCTGGAAAGCAACAGGAACTGATAGACCAATTTACTCCTCGGAGGGTAATAAATGCATAGGGCTTAAAAAGTCTCTTGTATTTTACAAAGGTCGAGCTGCAAAAGGCACCAAAACTGACTGGATGATGCACGAATTCAGACTTCCTTCCATCAGTGATTCATCATTCCCCAAAAGACCCCTCGAAAAGACAATTCCCATCAATGTATGTCTGATTGTATGTACAGAATAGTAAATAACTGCACCATTGGTGGGCAATGAAAATTTTAAACATTAGTTAATACAATAGGGTCATTTGTAGAATATGATTGCAGGAAGCCTACCGCTATTATTACCCTAATAATAAGCAATAACTAGGCTTTATTATATTGGAATGTTTACAGGAAGCATGGGTCATTTGTAGAATATTCAAGAAGACGACTTCTTTGGCGCAAAGAACGATAGCTCAGTCATGGGGATCGCAGTTTCAAGAAACAGTCACTGCCAAATCAGACATGTTTCCAGTTTCTGAAACCACTTACGCAAATCAACTTTTTGTATCAGACACTATCTCTTGCAGTACTAATAATACCACTACAAGCACTGAGCTGTCTTCTTCTTCAGTTCAATTCAACTTTCCTGCATTAGAATTTGACTTGGCCGATTTTACATTTTCTCAAGAAGATGTGCTCATGGATTCTATGCTGCTTAACTTAAGTCAGATTCCACAGAATAATGAATTAAGGGTCGATTTGCCTTTGGGATTTAATGATGAGATGAGATCAAACCCAGATAGGATCATCGTTAATGATACGCAGGGGGTTAATTTTCCATTCAATATGTCACCTGTTATGTGTGAAGACTGGAGATCAAATTTACTGTGGGATTCGCCTGCTTTTACTAATGAGAAATCTACTGGATTTTTCACAAATGTATGAGAATTGTTATTTCAAATTCATGCAAGTTATAAGCATTCACGCAAATTAGATGCAGATTTGATGGGTACTGTGTACCGTGTATTACTGTGAAATTATAATTTCAGCTAACAGCTAAACTGATATAGGCAGAGGAAATTGTAATTGTGTAAAATAAACATTAAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020255504.1	3.4e-74	protein FEZ-like
Swissprot	Q9ZVH0.1	2.1e-49	NAC domain-containing protein 9
trEMBL	A0A5P1F6X4	2.4e-74	NAC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G39820.1	68.12	9e-51	197	anac094;NAC094	NAC domain containing protein 94

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G03413	AT5G39820.1	138	30	4	1	124	68	205	68.12	9e-51	197
AfisC1G03413	AT1G26870.1	124	35	1	4	126	74	197	70.97	2e-48	189
AfisC1G03413	AT2G43000.1	116	36	2	5	120	70	176	61.21	2e-36	149

Ortholog group

Species	Genes
Allium cepa	g253380.t1
Allium fistulosum	AfisC1G03413
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	8	80	49.7	4.4e-13

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005992	P	trehalose biosynthetic process
GO:0006561	P	proline biosynthetic process
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009644	P	response to high light intensity
GO:0009718	P	anthocyanin-containing compound biosynthetic process
GO:0009723	P	response to ethylene
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009867	P	jasmonic acid mediated signaling pathway
GO:0009962	P	regulation of flavonoid biosynthetic process
GO:0010029	P	regulation of seed germination
GO:0010120	P	camalexin biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0042538	P	hyperosmotic salinity response
GO:0042542	P	response to hydrogen peroxide
GO:0042803	F	protein homodimerization activity
GO:0043068	P	positive regulation of programmed cell death
GO:0043565	F	sequence-specific DNA binding
GO:0045770	P	positive regulation of asymmetric cell division
GO:0045995	P	regulation of embryonic development
GO:0046982	F	protein heterodimerization activity
GO:0048103	P	somatic stem cell division
GO:0048317	P	seed morphogenesis
GO:0048527	P	lateral root development
GO:0048829	P	root cap development
GO:0051091	P	positive regulation of sequence-specific DNA binding transcription factor activity
GO:0080060	P	integument development
GO:0090400	P	stress-induced premature senescence
GO:1900056	P	negative regulation of leaf senescence
GO:1900057	P	positive regulation of leaf senescence
GO:1902074	P	response to salt
GO:1904250	P	positive regulation of age-related resistance

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network