Detail information of AfisC1G03523
| Gene | Chr | Start | End | Strand |
|---|---|---|---|---|
| AfisC1G03523 | chr1 | 658380377 | 658410120 | + |
| CDS |
| Protein |
| Gene |
| Database | accession number | e-value | annotation |
|---|---|---|---|
| nr | XP_020269143.1 | 0.0e+00 | DNA repair and recombination protein RAD54 isoform X1 |
| Swissprot | A4PBL4.1 | 0.0e+00 | DNA repair and recombination protein RAD54 |
| trEMBL | A0A5P1ERS1 | 0.0e+00 | Protein CHROMATIN REMODELING 25 |
| TAIR id | % identity | e-value | bit score | gene aliases | Short description |
|---|---|---|---|---|---|
| AT3G19210.1 | 67.53 | 0.0 | 1209 | ATRAD54;CHR25;RAD54 | homolog of RAD54 |
| Species | Genes |
|---|---|
| - | - |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|---|---|---|---|---|---|
| PF00176.20 | SNF2_N | Family | 196 | 483 | 192.8 | 6e-57 |
| PF00271.28 | Helicase_C | Family | 533 | 642 | 52.2 | 5.9e-14 |
| Accession | Ontology | Name |
|---|---|---|
| GO:0005515 | F | protein binding |
| GO:0000722 | P | telomere maintenance via recombination |
| GO:0000731 | P | DNA synthesis involved in DNA repair |
| GO:0036310 | F | annealing helicase activity |
| GO:0003677 | F | DNA binding |
| GO:0004386 | F | helicase activity |
| GO:0005524 | F | ATP binding |
| GO:0005737 | C | cytoplasm |
| GO:0005654 | C | nucleoplasm |
| GO:0006338 | P | chromatin remodeling |
| GO:0006417 | P | regulation of translation |
| GO:0007067 | P | mitotic nuclear division |
| GO:0007131 | P | reciprocal meiotic recombination |
| GO:0008298 | P | intracellular mRNA localization |
| GO:0015616 | F | DNA translocase activity |
| GO:0030261 | P | chromosome condensation |
| GO:0030491 | P | heteroduplex formation |
| GO:0032079 | P | positive regulation of endodeoxyribonuclease activity |
| GO:0032392 | P | DNA geometric change |
| GO:0045002 | P | double-strand break repair via single-strand annealing |
| GO:0045003 | P | double-strand break repair via synthesis-dependent strand annealing |
| GO:0046843 | P | dorsal appendage formation |
| GO:0051301 | P | cell division |
| GO:0051701 | P | interaction with host |
| GO:0071248 | P | cellular response to metal ion |
| GO:0071480 | P | cellular response to gamma radiation |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|---|---|---|---|
| K10875 | RAD54L, RAD54; DNA repair and recombination protein RAD54 and RAD54-like protein | EC:3.6.4.- | Homologous recombination | ko03440 |