Gene information

Detail information of AfisC1G03721

Location

Gene	Chr	Start	End	Strand
AfisC1G03721	chr1	698989849	698990642	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241441.1	7.4e-18	myb-related protein MYBAS2-like isoform X4
Swissprot	Q4JL76.1	4.1e-13	Myb-related protein MYBAS2
trEMBL	A0A444CZW0	8.5e-16	HTH myb-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G59780.2	36.43	4e-13	70.5	ATMYB59;ATMYB59-1;ATMYB59-2;ATMYB59-3;MYB59	myb domain protein 59

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G03721	AT5G59780.2	140	62	2	27	145	62	195	36.43	4e-13	70.5
AfisC1G03721	AT5G59780.1	137	59	2	27	142	18	148	37.23	5e-13	70.1
AfisC1G03721	AT5G59780.3	140	62	2	27	145	83	216	36.43	7e-13	69.7

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	28	51	29.1	7.6e-07

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135	F	transcription factor activity, RNA polymerase II transcription factor recruiting
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0006633	P	fatty acid biosynthetic process
GO:0006970	P	response to osmotic stress
GO:0009414	P	response to water deprivation
GO:0009611	P	response to wounding
GO:0009625	P	response to insect
GO:0009682	P	induced systemic resistance
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009845	P	seed germination
GO:0010023	P	proanthocyanidin biosynthetic process
GO:0010090	P	trichome morphogenesis
GO:0010438	P	cellular response to sulfur starvation
GO:0010439	P	regulation of glucosinolate biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding
GO:0048354	P	mucilage biosynthetic process involved in seed coat development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network