result

Gene information

Detail information of AfisC1G04376

Location

Gene	Chr	Start	End	Strand
AfisC1G04376	chr1	807564263	807565421	-

Sequences

CDS

Protein

Gene

>AfisC1G04376
ATGGATGTATGGAGTGCTGGGGTGATTTTATACATATTGTTGTGTGGTGTCCCTCTATTTTGGGCAGGTAATCTTAAATGTTACTGGTTAATCTTTAGTAACATGCTTGTGATGGAAGGAGATATTGTTTTAAATTGCAGAAACCAATGAGGAAATTGCACAGGCAATTGTTAGGTCAGAAATTGATTTTGAGAGGGAGCCATGGTCAAAGGTGTCAGAGAATGCAAAGGATCTTGTGAAATGTATGCTTGATCCGAACCCTTTTACAAGGCTAACAGCTAAAGAAGTTCTTGGTGAGTTCATCTTCATGTTTATGTCAAAAGTCGAAGCCTGAAATTAACAGCTACTCTTTTTTCTGTAGAACATCCATGGATGCAAAATGCAAATACAGCTCCAAACATTCCACTTGGAGAAACAGTGAGATGCAGGCTGAAATAGTTCTCAGTAATGAACAAGTTCAAGAAGAAAGCATTGTGAGTAATTAGCTCTGAACCTTTGATGGCTTTATGAAAGACTGGAGGCTTATTATCAAAAAGTTGATATATGCTCTTGTATAGGTTGTAGCCGAGCATTTACCTGTAGAAGAAATAACAGGATTCAAGGAGATGTTTCATATGATGGACAAAGATAAAAATGGAAATTTAACGCTTAAGGAACTCAAAGAGGGATTGAAAAATATGGGATCACCAATAGCAGAACCTGATGTTCAGATGTTAATGGAAGTAGTAAGTGTCCCTCGTCATCCTGCTTCTGTTAATGGTCAATATAATTTCTCTGATAATGCAGGAAACACACTTCGGTTACAAATTGCATTTTAATTCCACTTCTGTACAACATCACATCAGGATAGTTTGATGCATAAATCTGCTGAATTGTAGTTCATATGCAAAAATCATGTTCTTTATAGGCTCACTTATTACACGACGCAAACAAGATAAATGATTTCCTTCATATGTAACTATGACAGGCAGATGTTGATGGGAATGGTACACTAGACTGTGATGAATTTGTTACTGTATCAATTCAGCTAAAAAAGATAAGCAGTGAAGAGCATTTGTCAAAAGCTTTTAGATATTTTGATAAAGATGGGAATGGTTATATCGATATCCATGAACTAAGAGAAGCTTTGGCAGAGGGAGATCTTGGTCCTAATGAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK56846.1	1.2e-76	uncharacterized protein A4U43_C10F13710
Swissprot	Q2QVG8.1	1.7e-70	Calcium-dependent protein kinase 29
trEMBL	A0A5P1E768	8.9e-77	Calcium-dependent protein kinase 24

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G31500.1	57.46	5e-73	270	CPK24	calcium-dependent protein kinase 24

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G04376	AT2G31500.1	228	77	1	1	208	247	474	57.46	5e-73	270
AfisC1G04376	AT3G57530.1	231	87	2	1	211	244	473	53.25	9e-71	263
AfisC1G04376	AT5G12480.2	222	75	1	1	202	146	367	57.21	3e-70	261

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	1	78	63.5	1.7e-17
PF13499.3	EF-hand_7	Domain	107	164	36.3	4.9e-09
PF00036.29	EF-hand_1	Domain	178	203	32.7	2.5e-08

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0005739	C	mitochondrion
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004698	F	calcium-dependent protein kinase C activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0009506	C	plasmodesma
GO:0009536	C	plastid
GO:0009651	P	response to salt stress
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0018105	P	peptidyl-serine phosphorylation
GO:0046777	P	protein autophosphorylation
GO:0080092	P	regulation of pollen tube growth
GO:1901979	P	regulation of inward rectifier potassium channel activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network