result

Gene information

Detail information of AfisC1G04417

Location

Gene	Chr	Start	End	Strand
AfisC1G04417	chr1	814948374	814956976	+

Sequences

CDS

>AfisC1G04417
ATGGAGCAGAATTGTTGCCCTTCTCCAATTGCTTCAATTGTACAGAATAATAAACAAAAGCCAGAAATTCACTCAGAAAGTCAAAAGCTGCCTGACCTTGAAGTTCCATATCGTTTATTATATTGTTCTGGCAAGGGAGACAAAGATGGAGTTATTCAAGAAATTGATGGTGGTGTTTCACCAAATCTAGCGGATTATGATAAGAGAACTGCACTTCATTTGGCTTCTTGCGAAGGATGCACTGAAATTGTAAACCTGCTTATTGAAAAAGGTGCTAATGTCAATTCTGAAGATCGCTGGGGCCACACACCGTTATCGGACGCTAAGAGCTTTGGACATGAGGATATTTGTAAGATCCTGAAGGATTATGGCGGTACTGATCCGGTGGAGTTAGATGCTTCAAATCCTTTTTATGAAATTGATCACAGTGAGGTTGACATGGATGGTGCTGTACTTATCGGGGAGGGAGCATATGGTGAAGTCTACTTAGTGAAGTGGCGTGGCACAGAGGTTGCTGCTAAAACAATTCGCTCTTCAATAGCTTCAAACGATAGGGTGAGGAGTTGTTTCATGAAAGAACTTGGTCTGTGGCAAAGGTTGCGTCACCCAAATATAGTGCAGTTTCTCGGTGTATTGAAGCACCCAGATCGCCTTATATTCCTGACAGAGTATCTTAGAAAAGGAACCTTGTTTGAAATTCTGGAAAACAGAGGCAGGCTCGATTCTTTGACTGCAGTTACCTATGCACTGGATATTGCAAGGGGCATGAACTACCTTCACCGACATAAACCACATGCCATTGTACACAGGGACTTAACACCAAGAAATGTTTTACAAGATGAGGCGGGTCGACTGAAGGTTACAGATTTTGGATTGAGCAAGATTGCTGAAGAAAAGGGTTCATATGGTTCATACAAAATGACTGGAGGAACTGGATCATATAGATATATGGCACCAGAAGTCTACCGCCGGGAATCATATGGAAAAAGCGTTGATGTATTTTCATTTGCCTTTATTGTGCATGAGATGTTTCAAGGCAGACCTGCACATAGGGCAGAGACACCAGAGCTTGTGGCAGATAGGCGAGCTTATGAAGATTCTAGGCCATCTCTTTCTTCAATAGTATATCCAGAAAAAGTTAAAGTACTTCTCCGGGAGTGCTGGCACAAGGATCCTGAATGTCGTCCTTCCTTTGAAGAAATCATAATTAAACTTGAAGACATTCAAGAACATCTTGTGAGAAAAAGATCAATGAGATGTTGCAATACTTGTTCTATTTTGTAA

Protein

Gene

>AfisC1G04417
ATGGAGCAGAATTGTTGCCCTTCTCCAATTGCTTCAATTGTACAGGTAAATTTTTGATCTTTTTTTTTCCGACCCTTGTAATATTGCTGTGAACTGTAGATCCGATGCTAGTATTATGCTTTGATTTGTGGCATAAAGAGGAATATTATGTTCATTTGATTGGTAATTTAGGTCGAAATGAAATTAGTAAGCGGTAAGAGTCGAGCAATAACATACTAAGTTTGGCAGATGAAGAACTATGTAAGTATGCGAGTAGGTTGTTGCGGTTGGGGGAAATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCCAGTTGATCAAATCACTTTTGGACCTTTATTCATTTGCATCGTTAATGGAAAAATAAGGCAGTGTCAGAGTTCTTATAGATGTAATATCTTGTAATGAATTATGTTTTTCTTCTTCTTGGTTTCAGAATAATAAACAAAAGCCAGAAATTCACTCAGAAAGTCAAAAGCTGCCTGACCTTGAAGTTCCATATCGTTTATTATATTGTTCTGGCAAGGGAGACAAAGATGGAGTTATTCAAGAAATTGATGGTGGTGTTTCACCAAATCTAGCGGATTATGATAAGAGAACTGCACTTCATTTGGCTTCTTGCGAAGGATGCACTGAAATTGTAAACCTGCTTATTGAAAAAGGTGCTAATGTCAATTCTGAAGATCGCTGGGGCCACACAGTAAGTTTATTGGTGAATGCAGATTGCCTACATTTGAATAAAGAACACATTGTTTTGCATAGCAATACTTAATTGTGCTCAACCCTACTATTAGTGCTTTTTTGCATCCGAATCTGAGATTTGTTTTGATAACTGATTCATAGTATCTAAGTTTTGAAAGTACTTTCAAGATTTCATCATTTTTGTAAAAGTTTGGCTAACTTTGACACTTTTGTGTTCAATGTCAGCATTGTACCCAAAGGATAAAAAACAAAAAAAACTATTAGAATTTTAAAATAATGCACAAAGTGGACATGATTTCTTTCCTCTAGAAACTTTATTCCTCTATAACTTGATTATTGATTCGTGTCTACCATGGAATTCACAAGCTTCCGTGTTTTACATCATACCGCCTTTTCCACCGCAATCGATGAAGTTTCATCTTCAAGACTCTCTCATATATCGGACTGTTAACGAAACTCGTCTAACACTATGGAAAGGAACACAAAGAACCATTGTCTTATACTCTTCAATTGTCTCCGTTTCACTTCTCTATTGTTAGCGATCCTTACGTCACATAAAATTCATAACATAGGGTGCTTCAATTGTGATACCTTCATCTTCTGCCATATAACCTAACATCTTCTTTCAACCACCAAATAACTCTGATATTAGACTATTAGGGAAAATTTGGATTAACATCCTAAACACAACGGAAAAAAACAAGATGGGTTAATGGTGAGGTAGAACAAACAAAAAAATAATATACCAAAATAGGCAATTACAGATCACAAATGCACAAAGAGAAAAAAATCGCATACATACAACTTGAGAGGATTATTCTAATCTCTAAAGAATGATTATCTTTATACATAGATTGTTATTTAGGGTTCAAGTAATTGATTTACGGTAATAAATCAATGCCTCGTCAATTCTTCTATTCATGTGAGAAACGTTTGTCAATTTGATTTTTTCAGTTTCCTTCAATTTGCATGTGCCCAATGAAATGTCTTCTTTAATGAGCTAATTAGAGAATTAATTGATTACCTCCGTCTTTCGAAATAGTTTCTTCACATTTAGATAATTTTTTCTTGTATTATTTAATGCATTAAAAGTGACAATAATTTTGAGTCATAATTCCACCTTAACTCAGCCATCTTCACTACAAGAAAACTGCGGTTTACCTACGCCAAAATGGCGTAGACGGGGCGTAGGTAAATGCATTAACTACGTAACCCTTACGCCAATTTTGGCGTGGGTAAAACTTGCGTAGCTAATAAAATACCTACGCTTTACCTACGCCATCCGTTGGGTTGTTTCCTACGTCTTTCCTACGCCATGATTTTTCTACGTCTTTCTTACGCCTTGTTATTCCTACGATTTTGCTACGACATTTTTACTTCTTTCGTTACCCACGTCTTTTCTACGTCATCCGTTTACCTACGTCTTCCCTACGCCTTATTTTCCTACGCTTTTCCTATGCCATTCTTACATATTACATTTCCTACGTTTTATCTACGTCATCCATTCATCTACGGGTGCATCAATATTCCCTCTACCTATGCCTTTTCTAAAGCAATTTTGATATATTACTATTGTGTTTCATTTCACCATATTAAATAGAAACTAAAACCAACTTGTTCCACATATATACACATTCTGACAAAAAAAATTAACATCAAATCATTCATCTTTAATTCAAAAAACAAATATCTCATTCATATTACAAAGTCAAATAATATTAACACTACAACAAAACACTCTTTTTACAACGGGCAATGCCCGTTGTAGTACGGTTTTCGCAACGGGCATGTGCTCGTTGTAATAGACCTCGTTGTAATAGATCCACCACATTTTGCCTGCCTTCACAACTTCACTGACAAGCCGGTTACCATCATACTTCTGACACCAAAAATGTACTCCACTGACTAGAACTCCACCATATACAATAGTGCATAAAACAGTGCACACTGCCTCCACCTTTCTGCTCCTTTACAACTACCATCATCAACAATTCACTACCACCATACATTGTTTATCATACCACAGTACTGTTGTAAACTAAACGTCCATGCAAATCACCATTCCACAAACCAACGATAACTCATACTTGCATATCTCACATTCAATCACCCTACTTTCAACTTCAATACTTCATCACCATCCAATTCACTTCTACAGAGCATCACCTTTAAACCACTGCTTCATTACACATCACTGCAGTCAACTTCATTCACCACTGCTCCTTCCATTCTCCAAACAATCCTACCATATGTCAACAGCACTATAAAAATGAAAAGAACTGTCCCAGATAAACAAAATTTACTGAATGGTATCAGGTGTAGAAAGTAGAAAGTGAAAAAAGCAAGTAAAACCTTTCATTTTGAGAATTCGCTTTTTGATTTCTTAAGCACAAGCCTCACAATGCATGTGCACTTTCAGCACCACTGCAATCACTACAGGCTGCAATAAACAAACAAATAGGTAAAACAAATCATTAATTGCAAACTTACACCAGTAAATATGCATAATTTTTTGCTTTTTACCATTTACCAACACCATTAAGTATGGATTTTAGAATTCACCTAAGAATATAGTCAACTGAAATTTTCAATTCATTTTACAAATCTCACTCCACTTTCTTCATACAAGTGGAGTGCAATAAGCAAAATTTGATGAAAATGGAGTATGTTTTTCAATTCCCTGTACCTAAGTTTCTATGGTCCTAATAATTGATGTATTTCTGATTCTTGGAAGTATTCTAAACCCAAATTCATTGGTAATTATACCTTTTTGCACTAGCTTAAAGTATATCAGAATGCATTCATAATAAATTAACACTAGTGAATCAGGTAAACTTCATATCATGTTATGTTGAGTTTAAACCGTGCAATTTCAAAACTTAGATCCCATAAATTTAAGGCCTTAGCATAAATGTGGACCTATTATCATTAACTTGGAGTGGCAAATAGTATTGCTAAATTAACAAAAATAACATAAAAACTTTGCAAACAAGAACCTCCTCTTTTTTCTCTTCAATTGAAGTTTGACTGATATGAGTTAGTTGCAGTTGATTTGTTACTATTATCAAACATGCGATTACAAATAGATCAAGGGGGAGAAAAAGAAATCCAAATTTACCAGCTAGAATTTGCAATCCAAAAATTCAGCAAACTACCAAATAACCCAAATTCATATTCAAAACTCTTCAGCATTCAAACATCTTATTTCAAACAAACAAGGATCTTGAATTCAATGATATTTGAGTCAAAAAAGAAAAGAAAAGAAAAGAACGTACGAGTAGAACCACCATTATTGCACAACAACAAGCCTACCTCAATCTCCAGTATTACAATGAGGGTGTTGAGGAAACAGTTTAAGGACTTCCTTTGTAGATTCCATGAGCTCGGCCATTTCGGTTTCGGAGTCTTGAGATTCAGTGTTATTTGTAGATTTTTTGCTTCAGGAAGTGGTGTATTTTTCTCGAAATTTAGGCTGAATTTTACACGCCTTGTGGACGAACGAACGAAATTTAGGGTTTTTGAGAACAAGGGTCTGGATTTGGGAGCGTGAGAGGAATGGAGTAATTTGTTATTTTAATTTTCGGGGGACAAAAGGCGGGCTGTGAAATTTTCGGGGAAACAAAAGTAGTGTACTGCGGGTGTAGGAATGGCGTGGGAAATTTCTACACCTTCCTACGGCATACTTTTGGCGTAAGGAATTTCCTACGCCTTACATACGCCGATCTGGAAATGTAGAAAATTAACAGAGGCGTGGAAATGACATAGGAGATTATCTATGTCTTTTCTACGGTATAATTTTGGTGTAAGGGATTTTCTACACCTTTCCTACGCCTCGATTTTTTTTCTACGTATTAAAGTTGACGTAGGAAAGACGTAGAAAATTTCCTTACGTCTTCCCTACGCCTTTACCTCTTTCTACCTGTTTCCTACGCCTTCCCTACGCCCCGCCTTCTGGCGTAGGAAAAACGTTGGAAACTTTGCGTAGGAAATTGAAGTATTTTCTAGTAGTGCTTCCCGATCTTCTTTAATATGGAAACATTGTATCACTAAATTCTAACACATACGATATGATGAATAAAGCAGATATATGTGCATTGCATGTGTATTACTAATGTTATAGTAAGGAATTCATGTGAAATTTGCAGCCGTTATCGGACGCTAAGAGCTTTGGACATGAGGATATTTGTAAGATCCTGAAGGATTATGGCGGTACTGATCCGGTATTTCTTTCTCAGATAATTTTCTATTTGGTAAAGTTTGTTATACAATTCTCTTCCTGCTTTTGTAATGGGTTAGCTCGTCCAATTATACAAAAACACATTTCCGGGGATTTTATTGGTTGATTCGTATGCATACTACCGTTGATAATGTTATAGTTGCTATTTCATTATATTGAGAGACGTCGATATACTCAACGTTAAGTTACATAGTAATATAACTTTGTAATATACATTTAATAAAAAGCTGGGTATACAACCATATTTTGTTGCCGACATCTTTCAATCGTCTTGAGGAACTAAATTTGATGCTTAAATGCACAGCTCTGGATTGAATATCCTTGTGTGCAAAATCCTTGAAAACAGAAATAAATTACCAAACAATTACAATGTGTTTCTTAAATTTCTACTCTGTTAATACCGAATTGGAAAAATTCTAGGTTTGTGTGTTTTTTTATTACTTTTTGTAGTTGAATTCTCTCCATGTTTTGGATGGTTTCACTTTCTTGGAAAAAAAAAAATTCCATGAACTTTTTCCCTTGTTAGGTTTGGCAGTCTAAACTTTAAAATTCTTTTCTTCTAGGTGGAGTTAGATGCTTCAAATCCTTTTTATGAAATTGATCACAGTGAGGTTGACATGGATGGTGCTGTACTTATCGGGGAGGTAAGCAGTTAGTTTTCTTAGACATTGAGACTCCTTAGTAAATTCTCGCTAGTTCATTTAATGTTGCCAACAATTAATTCTTATTTTACTGTCGACTTTGCACATCCCCTTGACTCAGTAGCAACTACAGCTGCTATCATTTTATTAACTTTTTATTGCTATTAAATACAACTAGGGAGCATATGGTGAAGTCTACTTAGTGAAGTGGCGTGGCACAGAGGTTGCTGCTAAAACAATTCGCTCTTCAATAGCTTCAAACGATAGGGTGAGGTGAGTCTTGGTTCAAAAAGTTTATTTGATAGCTTTATACTTTTCACTTATTTCATCCCATTGAGGTTAGATCTGATTTTGCTAACGTGAAGATGCTTCACTACCCAAGAAGCTAAAATTTCAATATTCGTGACTGTTAAGCTACGATATACTCTCTATTTAATATCTGGTACTAACTTATTTGTTTAGTGACCAAGTCTTCCTAATTTTGAACTGGAATTATTCATGGAATGACATTTTTTATCCTTAGTTATTATTGAAAATATATGATAACAAAGAACAATTTATGATGTTAGACTGGCTTGTGTCTATGCTCAATGAAACTATTTGCTTATTGCTTAAATGGGCACTATATGAAAACACAGAACCTAAACTGTAGGCTCATGTCTAGAAAAGTATCAGTTACATGCAGGTTAATTTATTTTTTTACAACAATAAATAGAAAGGATGTGAAAAGGAGATTTCTATAATCATGGTGCTTTATTATTCTAATGGTCAATACTCCTCTTCAAGGTACATAATTGTCATTCATGCCCAACTTGTCTAGAATGCAAACAAACGATTATCCTGAGATTGATCATGAAGAACCTATACGTGCAGTCTACAGCATTCTCGGTCAAACTTCTGGCCGAGAATAGTGAGCTGCTAACAACTTCATTTTGTGTGTGTCTATAATCACTGAAACTGTGTGGCTATTCAGTGCAATTTAGGTAAACCCGAAATGCTGTTAGTTGGCAGCATATGTATATTTATACAAAGCAAAGATAATGAGTTGTGACTTGGTATATGTGCATACATACTAGGCAAATGCTTTTTTTTTTCCTTCAAAACAAAATATAATTTTTTATATGCTATATTCTTCTTATTAATATTTGTAAATGTATGATATGTAAATGTCTCAATATGTTGTTTGTTACCTGCATGAGTAATTCTACAAAAATGCAGGAGTTGTTTCATGAAAGAACTTGGTCTGTGGCAAAGGTTGCGTCACCCAAATATAGTGCAGTTTCTCGGTGTATTGAAGCACCCAGATCGCCTTATATTCCTGACAGAGTATCTTAGAAAAGTGAGTTTCTATGTCATCATTTGATGGAGCTACATAGTTTACTGTTATAAAACCTGTTTATAGAATTACTAACTGTATATTTTTACCAATGTAAGGGAACCTTGTTTGAAATTCTGGAAAACAGAGGCAGGCTCGATTCTTTGACTGCAGTTACCTATGCACTGGATATTGCAAGGTAATGGGTGTTTTTTTCCCCCTTTTGATCAAATATTTAAGATAAATATAACCAAATAGATATATGCCATTATGTATAGGATCACACGCATACTTCAATCTAATCAGATTAAAAATTTGTTGACCCGGTGATGTTAATTAGAAATAATACAACTCAAATATGATCATGGGTATCTTCCAATGGTTGCATGCATCTTAATTATTATAGCTTTCTGGAATTGCAAGTAAAGACTACCTCTAAATAGTTTTATCATATCAAGATATTTTTATCAAGCAGTACATAACCAAAAGTATACAATTATAAATAATCAAACTGCTTTTATTATTAACACATGTACATGCTTTAACCATAATCTACTACTAATCTCTTCTCCTGCATATGTTTCAGGGGCATGAACTACCTTCACCGACATAAACCACATGCCATTGTACACAGGGACTTAACACCAAGGTTGTTATAGCTAAAACACACATTCAATATATATCGAAGAGCATATTGACTAAATTTAAATAATTCATCCTGATTTGTTAATACTGTTGGCACAGAAATGTTTTACAAGATGAGGCGGGTCGACTGAAGGTTACAGATTTTGGATTGAGCAAGATTGCTGAAGAAAAGGGTTCATATGGTTCATACAAAATGACTGGAGGAACTGGATCATGTGAGCTTTCCATATTGCTCAGCTTCTTATTTATTTCTCCTTCGTCATATTAACATATACATCATTCGATGATGACTTATAAGTTAAATTATCAGATAGATATATGGCACCAGAAGTCTACCGCCGGGAATCATATGGAAAAAGCGTTGATGTATTTTCATTTGCCTTTATTGTGCATGAGGTATTGAAATAGCATGAATATTAAACATATAATAAAGCATTTTGATTAACTTACAATTGAACAATAGCACATACATCTTTTTCTTTGCAAATCCCATCAAAAATATTATATCAAACACTTCAAAGTTGCTTGCTGCAGATGTTTCAAGGCAGACCTGCACATAGGGCAGAGACACCAGAGCTTGTGGCAGATAGGCGAGCTTATGAAGATTCTAGGCCATCTCTTTCTTCAATAGTATATCCAGAAAAAGTTAAAGTGTGAGTAGTTCGCTATTTCAAATATATAATTTGTCTTAAATCACCTCTATTTTTTATAAGTAACAGCATAGCTATAACCTGTGATTAAATTCCTGATTTTACAGACTTCTCCGGGAGTGCTGGCACAAGGATCCTGAATGTCGTCCTTCCTTTGAAGAAATCATAATTAAACTTGAAGACATTCAAGAACATCTTGTGAGAAAAAGATCAATGAGATGTTGCAATACTTGTTCTATTTTGTAACTTAGAACACATTTTTTTGCAGCGTTCGTTCAAAATACTATAATGTGGAATGTATAGTTTTTCGCCTTCCTTTAGTGCATTGTAAAGTTTTGATTTATTTCCTACTTTCTTGAGAGCTATTTCGG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020260919.1	1.2e-195	serine/threonine-protein kinase STY8-like isoform X1
Swissprot	F4IS56.1	2.3e-50	Ankyrin protein kinase 1
trEMBL	A0A5P1F366	8.6e-196	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G58760.1	42.39	2e-85	312		Integrin-linked protein kinase family

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G04417	AT3G58760.1	394	210	7	38	420	52	439	42.39	2e-85	312
AfisC1G04417	AT4G18950.1	389	205	5	38	419	46	427	43.70	9e-84	307
AfisC1G04417	AT1G14000.1	362	186	4	65	412	68	427	44.20	3e-79	292

Ortholog group

Species	Genes
Allium cepa	g410508.t1
Allium fistulosum	AfisC1G04417
Allium sativum	Asa7G04469.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF12796.4	Ank_2	Repeat	42	128	46.6	3.4e-12
PF00069.22	Pkinase	Domain	152	402	181.4	1.9e-53

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0001666	P	response to hypoxia
GO:0002831	P	regulation of response to biotic stimulus
GO:0005829	C	cytosol
GO:0004709	F	MAP kinase kinase kinase activity
GO:0005634	C	nucleus
GO:0005768	C	endosome
GO:0005789	C	endoplasmic reticulum membrane
GO:0006970	P	response to osmotic stress
GO:0008219	P	cell death
GO:0009617	P	response to bacterium
GO:0009620	P	response to fungus
GO:0009658	P	chloroplast organization
GO:0009686	P	gibberellin biosynthetic process
GO:0009723	P	response to ethylene
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009744	P	response to sucrose
GO:0009750	P	response to fructose
GO:0009968	P	negative regulation of signal transduction
GO:0031347	P	regulation of defense response
GO:0032101	P	regulation of response to external stimulus
GO:0043506	P	regulation of JUN kinase activity
GO:0044431	C	Golgi apparatus part
GO:0045860	P	positive regulation of protein kinase activity
GO:0046330	P	positive regulation of JNK cascade
GO:0046777	P	protein autophosphorylation
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0061337	P	cardiac conduction
GO:0071281	P	cellular response to iron ion
GO:0098542	P	defense response to other organism
GO:2000035	P	regulation of stem cell division
GO:2000069	P	regulation of post-embryonic root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network