Detail information of AfisC1G04578


Location
GeneChrStartEndStrand
AfisC1G04578chr1837944435837954753+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020260221.12.8e-161trihelix transcription factor GT-1-like
SwissprotQ9FX53.13.6e-121Trihelix DNA-binding protein GT-1
trEMBLA0A5P1EYD52.0e-161Myb-like domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G13450.158.141e-129 459GT-1Homeodomain-like superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag105514.t1
Allium fistulosumAfisC1G04578
Allium sativumAsa7G07614.1
Arabidopsis thalianaAT1G13450.1; AT3G25990.1
Oryza sativaLOC_Os04g40930.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13837.3Myb_DNA-bind_4Domain4713176.02.1e-21

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0042802Fidentical protein binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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