result

Gene information

Detail information of AfisC1G04635

Location

Gene	Chr	Start	End	Strand
AfisC1G04635	chr1	845150879	845151865	+

Sequences

CDS

Protein

Gene

>AfisC1G04635
ATGGAAATTGGGGCCTCCCTGTCAACTACTGCTATCTCTCAGGTAAAATCCAATGACCATATTAAACCGTGCAAGTTGAATAGTATAAGCAAATAACAAATTATCTACTTTCTAGCTATCAGTTAATTAAAATTTACAGTATTGGTTACTCCTCCAAACTATAATAATACAAGTGGTAATGAAATTCAATTAACAAAACATTGAAATTAATATGAAGTTGGCTAAATGGATCTACATAAACAGGTCACAGGCAATGAAGATGAAGGAAATACAACTGAGGATTCAAGAGAGAGCAGCTCGAAGGATAAAAACAACAACAGTGGCAAAAATAAGAAGCCTGATTATGTTCATGTAAGAGCTAGACGAGGACAGGCAACAAACAGTCATAGTTTGGCTGAGAGAGTAAGTAGAGCGAATTCATTAACAATATTTATCGAACAAATATGAATAATTTAGATAACTGGGATCAATAAAGCATTTGAACGATAAAAATGCGGCAGGTGAGGAGGGAGAAGATAAGTGAGAGGATGAAATATTTGCAAGCTCTAGTGCCTGGTTGTGACAGGATCACTGGGAAAGCTGGCATGCTAGATGAAATCATCAACTATGTTCAATCCCTACAAAAGCAAGTTGAGGTATTTACATTACTAGCTACTTACATCCTGATCTTTTATATTTCCCCCGTTGCTAAAAGAAAGCAATGATCAAAACTTCTAAATGAATAATCATACATTCTACTTTGAGGCCGAGTGATACACATCATGTTCTCTCTATATACACTACTATCTCCACAACATTTTTATTTGGCAAATTTTTTTATATAAAAGAGAGTAATAAAAGCATGTTTTTAACATTCATTTTTAAAATCGTATCAACATGCAGTTTTTGTCGATGAAGCTTGCCACCGTAAAGCCAACGTTGAACCTGAACATGGATGCCTTATTAAGTAAAGAGGTAAATGTGAACCTCAGAGTAGAAATTAAGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_021738627.1	2.1e-35	transcription factor HBI1-like
Swissprot	Q8GY61.1	7.9e-35	bHLH transcription factor bHLH063
trEMBL	A0A803LP71	1.5e-35	BHLH domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G68920.1	61.76	1e-41	165		basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G04635	AT1G68920.3	136	41	2	13	137	253	388	61.76	1e-41	165
AfisC1G04635	AT1G68920.2	136	41	2	13	137	254	389	61.76	1e-41	165
AfisC1G04635	AT1G68920.1	136	41	2	13	137	254	389	61.76	1e-41	165

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	60	108	31.4	1.2e-07

Gene Ontology

Accession	Ontology	Name
GO:0001046	F	core promoter sequence-specific DNA binding
GO:0001228	F	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0006366	P	transcription from RNA polymerase II promoter
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046983	F	protein dimerization activity
GO:0009637	P	response to blue light
GO:0009739	P	response to gibberellin
GO:0009911	P	positive regulation of flower development
GO:0040008	P	regulation of growth
GO:0048446	P	petal morphogenesis
GO:0080147	P	root hair cell development
GO:1902448	P	positive regulation of shade avoidance
GO:2000488	P	positive regulation of brassinosteroid biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network