Detail information of AfisC1G04939
| Gene | Chr | Start | End | Strand |
|---|
| AfisC1G04939 | chr1 | 897991356 | 898006379 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | AEG75669.1 | 2.0e-38 | CCAAT-box binding factor HAP3-like protein |
| Swissprot | Q9SFD8.2 | 8.1e-37 | Protein LEAFY COTYLEDON 1 |
| trEMBL | F6LIE1 | 1.4e-38 | CCAAT-box binding factor HAP3-like protein |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT1G21970.1 | 60.31 | 3e-40 | 160 | AtLEC1;EMB 212;EMB212;LEC1;NF-YB9 | Histone superfamily protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC1G04939 | AT1G21970.1 | 131 | 40 | 1 | 1 | 119 | 64 | 194 | 60.31 | 3e-40 | 160 |
| AfisC1G04939 | AT5G47670.2 | 146 | 55 | 2 | 1 | 146 | 34 | 166 | 53.42 | 2e-38 | 155 |
| AfisC1G04939 | AT5G47670.1 | 146 | 55 | 2 | 1 | 146 | 63 | 195 | 53.42 | 2e-38 | 154 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00808.20 | CBFD_NFYB_HMF | Domain | 1 | 64 | 86.3 | 1.2e-24 |
| Accession | Ontology | Name |
|---|
| GO:0003700 | F | transcription factor activity, sequence-specific DNA binding
|
| GO:0044212 | F | transcription regulatory region DNA binding
|
| GO:0045893 | P | positive regulation of transcription, DNA-templated
|
| GO:0016602 | C | CCAAT-binding factor complex
|
| GO:0019760 | P | glucosinolate metabolic process
|
| GO:0032993 | C | protein-DNA complex
|
| GO:0043565 | F | sequence-specific DNA binding
|
| GO:0046982 | F | protein heterodimerization activity
|
| GO:0070491 | F | repressing transcription factor binding
|
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K08065 | NFYB, HAP3; nuclear transcription Y subunit beta | EC:- | Antigen processing and presentation | ko04612 |