result

Gene information

Detail information of AfisC1G04998

Location

Gene	Chr	Start	End	Strand
AfisC1G04998	chr1	906219281	906221588	-

Sequences

CDS

>AfisC1G04998
ATGTCTAAAGAGGTCGATCGTTCTTTAATTCAAACAATTGGAACGATGACCGTACGTAAAGGCGATCTGAATGTGAAAACTCTACTCAGAACCGGTTTATTGGAAGGACTCCCTGTAAAATACAGGAAAGGGGAAGACGAGCTCGACGGGTTCATAAAGGATGAGGGCTACCTATGCGGTTGCTCGTCCTGTAACTTCTCAATTGTCGTCTCTGCCCTCAAGTTTGAATCACACGCAGGTGCAAATTCTTCAAACCAGAACAATCATATTTTTCTTAGCTCTGGAATTTCTCTGTATGCTCTTGTCAAAAAGTTAGAATCTTCTTCGGTCCAGTCATTGCAGGATGCCATAGAAGAATACCTTGGGTCGGTTCCAGTTCCTAATTGCAGTAGGGACACGGTAAAAAGGGATACTTCTGTTCAATCAGATACCAAGGTAACTGTGGATTTTAATCTCAGTTCAGGTTTAAACATCAAATCATCCTTAACAGGGGACGGTTTGTCGAAAAATACCAATGAAGGATCCGGTCGTGAAAGCCGATCCTTTACACATCAGTTACGAAAGGTTCAAGATGAATCAACAACCACTGATAGATCATCAAAAACCATCAATAAAACAGTAAGGTTTTCGGGATGTGAATCTGGTTACGAGTTTAAAACTTGCCGCAATCAGTTACCAAATCTTCAAGATGAATCAACAACCACTGATAGATCATCAAAAACCATCAATAAAACAGTAAGGTTTTCGGGATGTGAATCTGGTTACGAGTTTAAAACTTGCCGCAATCAGTTACCAAATCTTCAAGATGAATCAACAACCACTGATAGATCATCAAAAACCATCAGTAAAACAGTAAGGTTTTCGGGATGTGAATCTGGTTACGAGTTTAAAACTTGCTGCAATCAGTTACCAAATCTTCAAGATGAATCAACAACCACTGATAGATCATCAAAAGCCATCAATAAAACAGTAAGGTTTTCGGGATGTGAATCTGGTTACGAGTTTAAAACTTGCCGCAATCAGTTACCAAACCTTCAAGATGAATGGACATTGAATTCCGTCGAGGACGGTCAGAGAAAGAAGACAGGGGCGTTGCGCAAACTGGCATTATTCAAACTCGAGAACGGAACGGACTTGTTCTACGTATCGAACGGAAAGGAGGTTCTAAAAGGCTACAAAACGGAAAACGGAATATTTTGCTATTGCTGCAATGAAGTAGTCAGCCCTTCGAAATTCGAAGCTCATGCCGGGTTTGCTTCAAGGCGGCAACCATATCACAACATCTTCACCTCCGAAGGCGTCTCTCTCGAAAAGCTTGCAAGTCTGCACTCAGAACTCGATCCAGAACGCGAACCGGAATTTGTGCCTGGTACGAAAGCCAAACGGGATAAACCGAAGAAGAGTGTGATGGATTTACCGAAAGGATTCGGAGGGTGCACCGTATGCAAAGGCCTGGCATTCGAAACAGGAGAAGAATTATTCAGTTCTAAGTCGTTCATCTTCTGCGGCCAGTGCGAGAGAGTGTACCACGTCGGGTGCGTAGGAATCGGGTCACAAGAGAGACCATCGCCATGGTACGACTGGTTATGTTCCGACGACTGTAAAGAAGTGAACAATCATTTAAAAGGGTGTACAAACTCTTCGCCTCATGGAAACAAGGACGTGAAGTGGACGCTTTTGAGAGGTGCTTGGAGCAAAACTACCAACGAAAATGAAGCGATGTTTTCGAGAGCGACGTCGATATTAAGAGACGGGTTTGGGGAGATAATGGCGGAGGGGGATGATGTGCTGCAGGCCATGGTGGAAGGAGGGGAGACAAGGAAGGTGCATTTTGGAGGGATGCACTGCGTGGTGGTGAGTAGGAATTCGGAGGCGGTGGCGTGCGGTGTGTTTAGAGTTTTTGGACGGGAGTTGGCGGAGTTGCCGTTGGCGGCGACGGATAAAGAGTGCCGTGGGAACGGGTATTTTAGATGGCTTTTGGATGTGGTGGAGGAGTTGGTGGTTGCAATGAAGGTGAAGGCTTTGGTTGTGTGTGTGGATGAAGAGAAGCAGCTGCTTTGGAAGGACAAGTTTGGGTTTGTGAGAGTGAGTGAGAAGACTGCGATCAGGTATGCTGAAGATTATTGGATTGTAAGGTTCAAGAAGAAGGTTATATTGGAGAAATCTTTGGTTTCTATAATAGATTCATTTGGAAGATAG

Protein

Gene

>AfisC1G04998
ATCGATTTCTTCGGGGATTCAAAGCCATTATGCAACGCAAATCGATTTGAAGCAGAGCGTATAAACATCAGAATTCAAATCAGGTAAGTTTTTCCCAAATTGAAAACCAATGTCTAAAGAGGTCGATCGTTCTTTAATTCAAACAATTGGAACGATGACCGTACGTAAAGGCGATCTGAATGTGAAAACTCTACTCAGAACCGGTTTATTGGAAGGACTCCCTGTAAAATACAGGAAAGGGGAAGACGAGCTCGACGGGTTCATAAAGGATGAGGGCTACCTATGCGGTTGCTCGTCCTGTAACTTCTCAATTGTCGTCTCTGCCCTCAAGTTTGAATCACACGCAGGTGCAAATTCTTCAAACCAGAACAATCATATTTTTCTTAGCTCTGGAATTTCTCTGTATGCTCTTGTCAAAAAGTTAGAATCTTCTTCGGTCCAGTCATTGCAGGATGCCATAGAAGAATACCTTGGGTCGGTTCCAGTTCCTAATTGCAGTAGGGACACGGTAAAAAGGGATACTTCTGTTCAATCAGATACCAAGGTAACTGTGGATTTTAATCTCAGTTCAGGTTTAAACATCAAATCATCCTTAACAGGGGACGGTTTGTCGAAAAATACCAATGAAGGATCCGGTCGTGAAAGCCGATCCTTTACACATCAGTTACGAAAGGTTCAAGATGAATCAACAACCACTGATAGATCATCAAAAACCATCAATAAAACAGTAAGGTTTTCGGGATGTGAATCTGGTTACGAGTTTAAAACTTGCCGCAATCAGTTACCAAATCTTCAAGATGAATCAACAACCACTGATAGATCATCAAAAACCATCAATAAAACAGTAAGGTTTTCGGGATGTGAATCTGGTTACGAGTTTAAAACTTGCCGCAATCAGTTACCAAATCTTCAAGATGAATCAACAACCACTGATAGATCATCAAAAACCATCAGTAAAACAGTAAGGTTTTCGGGATGTGAATCTGGTTACGAGTTTAAAACTTGCTGCAATCAGTTACCAAATCTTCAAGATGAATCAACAACCACTGATAGATCATCAAAAGCCATCAATAAAACAGTAAGGTTTTCGGGATGTGAATCTGGTTACGAGTTTAAAACTTGCCGCAATCAGTTACCAAACCTTCAAGATGAATGGACATTGAATTCCGTCGAGGACGGTCAGAGAAAGAAGACAGGGGCGTTGCGCAAACTGGCATTATTCAAACTCGAGAACGGAACGGACTTGTTCTACGTATCGAACGGAAAGGAGGTTCTAAAAGGCTACAAAACGGAAAACGGAATATTTTGCTATTGCTGCAATGAAGTAGTCAGCCCTTCGAAATTCGAAGCTCATGCCGGGTTTGCTTCAAGGCGGCAACCATATCACAACATCTTCACCTCCGAAGGCGTCTCTCTCGAAAAGCTTGCAAGTCTGCACTCAGAACTCGATCCAGAACGCGAACCGGAATTTGTGCCTGGTACGAAAGCCAAACGGGATAAACCGAAGAAGAGTGTGATGGATTTACCGAAAGGATTCGGAGGGTGCACCGTATGCAAAGGCCTGGCATTCGAAACAGGAGAAGAATTATTCAGTTCTAAGTCGTTCATCTTCTGCGGCCAGTGCGAGAGAGTGTACCACGTCGGGTGCGTAGGAATCGGGTCACAAGAGAGACCATCGCCATGGTACGACTGGTTATGTTCCGACGACTGTAAAGAAGTGAACAATCATTTAAAAGGGTGTACAAACTCTTCGCCTCATGGAAACAAGGACGTGAAGTGGACGCTTTTGAGAGGTGCTTGGAGCAAAACTACCAACGAAAATGAAGCGATGTTTTCGAGAGCGACGTCGATATTAAGAGACGGGTTTGGGGAGATAATGGCGGAGGGGGATGATGTGCTGCAGGCCATGGTGGAAGGAGGGGAGACAAGGAAGGTGCATTTTGGAGGGATGCACTGCGTGGTGGTGAGTAGGAATTCGGAGGCGGTGGCGTGCGGTGTGTTTAGAGTTTTTGGACGGGAGTTGGCGGAGTTGCCGTTGGCGGCGACGGATAAAGAGTGCCGTGGGAACGGGTATTTTAGATGGCTTTTGGATGTGGTGGAGGAGTTGGTGGTTGCAATGAAGGTGAAGGCTTTGGTTGTGTGTGTGGATGAAGAGAAGCAGCTGCTTTGGAAGGACAAGTTTGGGTTTGTGAGAGTGAGTGAGAAGACTGCGATCAGGTATGCTGAAGATTATTGGATTGTAAGGTTCAAGAAGAAGGTTATATTGGAGAAATCTTTGGTTTCTATAATAGATTCATTTGGAAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264457.1	2.1e-99	uncharacterized protein LOC109840292 isoform X2
trEMBL	A0A5P1EUG2	1.6e-64	N-acetyltransferase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G27980.1	31.90	1e-37	155		Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G04998	AT3G53680.1	280	159	6	476	729	563	837	32.14	8e-38	155
AfisC1G04998	AT3G53680.1	120	65	2	12	124	168	287	40.00	4e-18	90.5
AfisC1G04998	AT3G53680.1	196	100	5	357	550	385	544	29.59	4e-16	84.0

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF16135.2	Jas	Family	30	91	25.3	1.1e-05
PF16135.2	Jas	Family	372	429	64.8	5.4e-18
PF00628.26	PHD	Domain	479	535	29.1	6.3e-07

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network