Detail information of AfisC1G05113


Location
GeneChrStartEndStrand
AfisC1G05113chr1931200726931234384+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAIA59799.13.0e-72myb family transcription factor APL
SwissprotQ94A57.12.5e-39Myb family transcription factor PHL2
trEMBLA0A1P7XN962.2e-72Myb family transcription factor APL

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G24120.166.671e-55 212Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain358634.61.4e-08
PF14379.3Myb_CC_LHEQLEFamily12917272.02.2e-20

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000719Pphotoreactive repair
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003913FDNA photolyase activity
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0007623Pcircadian rhythm
GO:0009536Cplastid
GO:0009555Ppollen development
GO:0009567Pdouble fertilization forming a zygote and endosperm
GO:0009650PUV protection
GO:0010628Ppositive regulation of gene expression
GO:0016036Pcellular response to phosphate starvation
GO:0043565Fsequence-specific DNA binding
GO:0055063Psulfate ion homeostasis
GO:0071486Pcellular response to high light intensity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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