Detail information of AfisC1G05214
| Gene | Chr | Start | End | Strand |
|---|
| AfisC1G05214 | chr1 | 950616560 | 950639999 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | KAE9609470.1 | 3.2e-08 | putative chromatin remodeling & transcriptional activation HMG family |
| Swissprot | Q42344.1 | 2.8e-09 | Nucleosome/chromatin assembly factor group D 04 |
| trEMBL | D6MK10 | 3.0e-08 | Transcription factor (Fragment) |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT2G17560.1 | 45.68 | 8e-11 | 65.9 | HMGB4;NFD04;NFD4 | high mobility group B4 |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC1G05214 | AT2G17560.2 | 81 | 37 | 3 | 240 | 315 | 15 | 93 | 45.68 | 8e-11 | 65.9 |
| AfisC1G05214 | AT2G17560.1 | 81 | 37 | 3 | 240 | 315 | 15 | 93 | 45.68 | 8e-11 | 65.9 |
| AfisC1G05214 | AT2G17560.3 | 81 | 37 | 3 | 240 | 315 | 15 | 93 | 45.68 | 8e-11 | 65.9 |
| Species | Genes |
|---|
| Allium cepa | g39342.t1 |
| Allium fistulosum | AfisC1G05214 |
| Allium sativum | |
| Arabidopsis thaliana | |
| Oryza sativa |
|
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00505.16 | HMG_box | Domain | 264 | 317 | 35.1 | 1.2e-08 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| - | - | - | - | - |