Detail information of AfisC1G05390


Location
GeneChrStartEndStrand
AfisC1G05390chr1986354786986374604-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020251788.14.9e-172integrin-linked protein kinase homolog pat-4-like
SwissprotF4IS56.14.1e-38Ankyrin protein kinase 1
trEMBLA0A5P1FT873.5e-172Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G58760.137.302e-61 233Integrin-linked protein kinase family

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag140657.t1
Allium fistulosumAfisC1G05390
Allium sativumAsa7G03929.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12796.4Ank_2Repeat139240.23.5e-10
PF07714.14Pkinase_TyrDomain131369100.86.8e-29

Gene Ontology
AccessionOntologyName
GO:0006936Pmuscle contraction
GO:0030036Pactin cytoskeleton organization
GO:0004672Fprotein kinase activity
GO:0005488Fbinding
GO:0006468Pprotein phosphorylation
GO:0007154Pcell communication
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0043229Cintracellular organelle
GO:0044057Pregulation of system process
GO:0044444Ccytoplasmic part
GO:0044459Cplasma membrane part
GO:0044700Psingle organism signaling
GO:0044702Psingle organism reproductive process
GO:0048518Ppositive regulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06272ILK; integrin-linked kinaseEC:2.7.11.1 Focal adhesionko04510
PPAR signaling pathwayko03320
Axon guidanceko04360

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.