result

Gene information

Detail information of AfisC1G05461


Location
GeneChrStartEndStrand
AfisC1G05461chr110009210731000921306-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010522876.11.3e-18PREDICTED: B3 domain-containing transcription factor NGA3
SwissprotQ9MAN1.13.8e-20Protein NGATHA3
trEMBLA0A811NY059.1e-19AP2/ERF and B3 domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT1G01030.163.014e-2196.3NGA3AP2/B3-like transcriptional factor family protein

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Ortholog group
SpeciesGenes
Allium cepag285090.t1; g391845.t1
Allium fistulosumAfisC1G05461
Allium sativumAsa5G00579.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family66359.52.1e-16

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0009536Cplastid
GO:0009741Presponse to brassinosteroid
GO:0009873Pethylene-activated signaling pathway
GO:0009910Pnegative regulation of flower development
GO:0010073Pmeristem maintenance
GO:0010358Pleaf shaping
GO:0044212Ftranscription regulatory region DNA binding
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0019760Pglucosinolate metabolic process
GO:0043565Fsequence-specific DNA binding
GO:0048527Plateral root development
GO:0048573Pphotoperiodism, flowering
GO:0080113Pregulation of seed growth
GO:0080167Presponse to karrikin

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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