result

Gene information

Detail information of AfisC1G05463

Location

Gene	Chr	Start	End	Strand
AfisC1G05463	chr1	1001094834	1001095598	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020229690.1	4.6e-78	AP2/ERF and B3 domain-containing transcription factor RAV1
Swissprot	Q8RZX9.1	2.7e-75	AP2/ERF and B3 domain-containing protein Os01g0693400
trEMBL	A0A2K3P353	8.2e-77	Ap2/erf and B3 domain-containing transcription factor at1g50680-like protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G25560.1	63.00	7e-78	286	AtTEM1;EDF1;TEM1	AP2/B3 transcription factor family protein

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Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	23	70	30.4	3e-07
PF02362.18	B3	Family	143	233	89.9	7.4e-26

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009536	C	plastid
GO:0009741	P	response to brassinosteroid
GO:0009873	P	ethylene-activated signaling pathway
GO:0009910	P	negative regulation of flower development
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043565	F	sequence-specific DNA binding
GO:0048366	P	leaf development
GO:0048527	P	lateral root development
GO:0048573	P	photoperiodism, flowering
GO:0080113	P	regulation of seed growth
GO:0080167	P	response to karrikin

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09287	RAV; RAV-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network