Detail information of AfisC1G05489
| Gene | Chr | Start | End | Strand |
|---|
| AfisC1G05489 | chr1 | 1005864921 | 1005868057 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | KAE9609470.1 | 8.7e-10 | putative chromatin remodeling & transcriptional activation HMG family |
| Swissprot | Q42344.1 | 3.8e-10 | Nucleosome/chromatin assembly factor group D 04 |
| trEMBL | A0A3B6TSR6 | 1.1e-09 | HMG box domain-containing protein |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT2G17560.1 | 52.38 | 1e-11 | 64.7 | HMGB4;NFD04;NFD4 | high mobility group B4 |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC1G05489 | AT2G17560.2 | 63 | 25 | 2 | 10 | 67 | 31 | 93 | 52.38 | 1e-11 | 64.7 |
| AfisC1G05489 | AT2G17560.1 | 63 | 25 | 2 | 10 | 67 | 31 | 93 | 52.38 | 1e-11 | 64.7 |
| AfisC1G05489 | AT2G17560.3 | 67 | 28 | 2 | 6 | 67 | 27 | 93 | 50.75 | 1e-11 | 64.7 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00505.16 | HMG_box | Domain | 16 | 69 | 42.3 | 7e-11 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| - | - | - | - | - |