Detail information of AfisC1G05696
| Gene | Chr | Start | End | Strand |
|---|---|---|---|---|
| AfisC1G05696 | chr1 | 1044433409 | 1044466725 | - |
| CDS |
| Protein |
| Gene |
| Database | accession number | e-value | annotation |
|---|---|---|---|
| nr | XP_020256714.1 | 0.0e+00 | switch 2 |
| Swissprot | F4I2H2.1 | 1.1e-301 | Protein CHROMATIN REMODELING 9 |
| trEMBL | A0A5P1F935 | 0.0e+00 | Switch 2 |
| TAIR id | % identity | e-value | bit score | gene aliases | Short description |
|---|---|---|---|---|---|
| AT1G03750.1 | 62.77 | 0.0 | 1083 | CHR9 | switch 2 |
| Species | Genes |
|---|---|
| Allium cepa | g175974.t1 |
| Allium fistulosum | AfisC1G05696 |
| Allium sativum | Asa7G03734.1 |
| Arabidopsis thaliana | AT1G03750.1 |
| Oryza sativa | LOC_Os05g15890.1; LOC_Os05g15890.2 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|---|---|---|---|---|---|
| PF00176.20 | SNF2_N | Family | 147 | 408 | 177.5 | 2.7e-52 |
| PF00271.28 | Helicase_C | Family | 527 | 639 | 63.6 | 1.8e-17 |
| Accession | Ontology | Name |
|---|---|---|
| GO:0000166 | F | nucleotide binding |
| GO:0005515 | F | protein binding |
| GO:0000280 | P | nuclear division |
| GO:0000724 | P | double-strand break repair via homologous recombination |
| GO:0003676 | F | nucleic acid binding |
| GO:0032784 | P | regulation of DNA-templated transcription, elongation |
| GO:0042623 | F | ATPase activity, coupled |
| GO:0016020 | C | membrane |
| GO:0004386 | F | helicase activity |
| GO:0005654 | C | nucleoplasm |
| GO:0006289 | P | nucleotide-excision repair |
| GO:0006979 | P | response to oxidative stress |
| GO:0009411 | P | response to UV |
| GO:0010035 | P | response to inorganic substance |
| GO:0010332 | P | response to gamma radiation |
| GO:0010628 | P | positive regulation of gene expression |
| GO:0022402 | P | cell cycle process |
| GO:0032147 | P | activation of protein kinase activity |
| GO:0043232 | C | intracellular non-membrane-bounded organelle |
| GO:0043234 | C | protein complex |
| GO:0043506 | P | regulation of JUN kinase activity |
| GO:0044707 | P | single-multicellular organism process |
| GO:0044767 | P | single-organism developmental process |
| GO:0044877 | F | macromolecular complex binding |
| GO:0046330 | P | positive regulation of JNK cascade |
| GO:0051321 | P | meiotic cell cycle |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|---|---|---|---|
| K20098 | ERCC6L2; DNA excision repair protein ERCC-6-like 2 | EC:3.6.4.- | - | - |