Detail information of AfisC1G05851


Location
GeneChrStartEndStrand
AfisC1G05851chr110711992781071200364+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256820.13.5e-68protein Barley B recombinant-like
SwissprotP0DH88.15.8e-52Barley B recombinant-like protein B
trEMBLA0A5P1EMS03.3e-68GAGA-binding transcriptional activator

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G14685.143.857e-58 220ATBPC2;BBR/BPC2;BPC2basic pentacysteine 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF06217.9GAGA_bindDomain1268282.76e-84

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005737Ccytoplasm
GO:0005730Cnucleolus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009723Presponse to ethylene
GO:0042803Fprotein homodimerization activity
GO:0043565Fsequence-specific DNA binding
GO:0050793Pregulation of developmental process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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