result

Gene information

Detail information of AfisC1G05931

Location

Gene	Chr	Start	End	Strand
AfisC1G05931	chr1	1088377293	1088378653	-

Sequences

CDS

Protein

Gene

>AfisC1G05931
GTTTACACGAATTTGCACCATCATTTATCTTGAGTTTAAGAATGGCATTAGAAGCTATAGTTTTCCCAGAAGACTCATTTAGTTATTCTTCCATAGTAGGATGGGGTTTCGATTATCAATTAGATAACTTATTAGATTTGGAGGAGGTGAAGAGTTCTTCACTTGAAAATTTCGATGATACAAACGTTAAGACATTATTAGGCGAGATTGATCAAGGAAAAGTACAGATTGGTAATACAAGAAGAAAAAGAAGAAGAACAAAAAGCTACAAGAATCAAGAGGAGGTGGAGAATCAAAGAATGACACACATTGCAGTCGAACGTAATCGAAGAAAACAAATGAATGAACATCTATCCGTTCTTCGGTCTCTAATGCCACCATCCTATTCTCAAAGAGTACGTCTTTTTCCTTATTTGTCTTCTTCTTGTTTTTTTTCCCCTTCTTTTTTCACTTCAATTTACTATATATTCATTTGAAAATATGATTACTGATATAAGAGATAAAGGAATTTTCAGCAATGGTACAAATTATTAGCTGTGCTAGTACAGGCAATTTGTTATAATGCTGGGATAGACCATGGTCTTATTAATAGTGTATCAATTATTAACAACAGATATATCATAAAAGAAACTTGTGCTATAACCGCACAACTGATAAATATTCATAAATTATAATACATTGAAATCGTGTGTGTAGGGCGATCAAGCATCAATAGTTGGAGGAGCAGTAAATTTTGTGAAGGAGCTAGAGCAAATCTTACAAACCCTAGAAGCACAAAAGCACATCAAAAATGAGTGTACTAACAAATCTAAAATGCATTCATCCCCATTTTCTAGCTTCTTTACTTCCCCACAATATTCATCTAGCAGTACTCAAGAAGTGAAGGCTGATATTCAAGTAATGATGATCGAAAGCCATGTGAATCTGAAAATCCAATTACAGAAACAGCCTAAACAGTTGATTAAGTTAGTTATGGGTCTTCAGAGTTATATGCTAACAACATTGCATTTGAATGTGACAGCTGCATCTGACCAAATGGTTATGTATTCTTTTAGCCTTAAGGTATGCCTTATATACTATTTGATCATTTTAAGGTATTTTTGAATTTTAAATAAGTGGAGATTTTTCATATGTTAGGTTGAAGATGAATGCCGATTGACATCAGTTGATGAGATTGCTGCAGCTGTATATCAAATGATTGTGAGGATCCAATATGACAATATATGTAGCTGAAATAAGCTTAAAATGATGTTTTTTCTTTGTTAAGTACATTATAACTTTTAGATTCTTATAGTAAGAGTTATTTATGAAATTTAGCATATTTGCTACTAATCGTTTTCAACTTTAGATATTTCCAACTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020255275.1	1.3e-70	transcription factor bHLH94-like
Swissprot	Q9SK91.2	2.3e-48	bHLH transcription factor bHLH094
trEMBL	A0A5P1FD14	2.3e-69	BHLH domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G72210.1	45.94	2e-57	219		basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G05931	AT1G72210.1	320	112	7	1	265	1	314	45.94	2e-57	219
AfisC1G05931	AT1G22490.1	310	117	9	1	265	1	301	44.84	1e-55	213
AfisC1G05931	AT2G46810.1	186	87	1	78	261	184	369	52.15	3e-46	182

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	85	136	44.9	7.3e-12

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0046983	F	protein dimerization activity
GO:0009913	P	epidermal cell differentiation
GO:0010377	P	guard cell fate commitment
GO:0010444	P	guard mother cell differentiation
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045597	P	positive regulation of cell differentiation
GO:0051782	P	negative regulation of cell division
GO:0061086	P	negative regulation of histone H3-K27 methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network