result

Gene information

Detail information of AfisC1G06301

Location

Gene	Chr	Start	End	Strand
AfisC1G06301	chr1	1142238011	1142242876	+

Sequences

CDS

>AfisC1G06301
ATGGAGTTTTCGGTAGGTGGTAGCCATATAATCATGCAGAGTTTCGAACCTAACGGAGAGATTTTTGGTTTTCAACAAGCAAATCCTAACCCTAATGTTCAGGGTCTTTCTTTATCACTATACAACCCTATGGACATAGCTTCTCATCAAGAACAATTATTTATGGATGATGGAAGTGGAAGGCTTAATCTTTTTCAATCATCACATCATCAACACCACCAACAACAGCAATTGCAGCAGCCTTTTGTGTTGAAGAAATCAAAGTATGTGATTCCAGCTCAAGAGCTTTTAAATGAGTTTTGTAATCTTGGAAATATTAGTGATAATAATAATAATAACAATAATGGAAGTTCGAAGAAGAAGGAACACAAAGGAATATGGAATGAAGGATGTTCATCTTCGTCGCTCTATACCATGGATCTTGGTGAACTTCAAAAGAGAAAGGCTAAACTTCAGTCCATGCTTGAGGAGGTTCACAGAAGATACAGAAGATACTGTGATGAAATGAGGTCAGTAGTTTCCGCCTTTGAAGCAATAGCAGGCGAAAACTCAGCAAACGTGTATGCAACTCTAGCATCAAAAGCAATGTCGAGGCATTTTCGATGCTTAAAAGATGGAATTACAGGTCAACTTCAGGCAACAAAAATGGCTCTAGGTGAAAGAGATGGTAATTCTAGCAGTAATAATGCAATTGCGCCAGGAACAACTAGAGGTGAAACTCCTAGACTGAAAAGGTTGGAGCAATGTCTTAGGCAACAAAAAGCTTTTCATCAGGCAGCAATTATGGAGAGCCAGCCATGGCGGCCTCAGAGGGGCCTACCTGAACGCTCCGTTTCTGTTCTTAGGGCTTGGTTATTCGAACATTTCCTCCATCCGTATCCAAGCGACGTCGACAAGCATATTTTAGCCAGACAAACAGGTCTCTCTAGAAGCCAGGTGTCCAATTGGTTCATAAATGCAAGAGTGAGACTATGGAAGCCAATGGTAGAAGAGATGTACTTGGAAGAATTAAAAGAGGAAGGAAATTTGAACCCTAACACGAACCCTAGTTCCCCTCAAGTTCAATTAGAGGATCAAAAGCCTGTGTCTGGCTTTCATATCAACAATGATTCAGACTCCCTCTCTTCGATCATTAACAACAATCGAAACCCTAACACAAACAACAATCCTAATTTTGGAGTTGTTGATTTGGATTTCTCATCATACAATGCAAGCAATGATGTCTCGCTTACACTGGGATTGCAGCAACAGGAGCAATCTCTTCTCTTCTCTAGAGAAGACGATGATGACAGAGGGGTTCAATTTTCTGTTTTAGACGATGAAGAACAAAATCTGATGCAACACAGGAATTTCATGGGTGCTCAGTTGCTACATGATTTGATATGA

Protein

Gene

>AfisC1G06301
TTAAAATATTATATTAGCAAAGAAAAAGAAAGGCGAACTCCTACTTTGTAATTCCTACAAATTAATCCATGCTTTACTCACCGTTTATATATTAACATATCTCTACTGTCAAAGATAATATCATTATATTATAATCTCTGTACTACCATCCCCATAAATCCTTCTTTTCTTCTTCATCGTACTTTCTATCCAGAGTTGAGATCTTATATTTGCTCTTTCCTGACCAGATAAAATTTTATTATGGAGTTTTCGGTAGGTGGTAGCCATATAATCATGCAGAGTTTCGAACCTAACGGAGAGATTTTTGGTTTTCAACAAGCAAATCCTAACCCTAATGTTCAGGGTCTTTCTTTATCACTATACAACCCTATGGACATAGCTTCTCATCAAGAACAATTATTTATGGATGATGGAAGTGGAAGGCTTAATCTTTTTCAATCATCACATCATCAACACCACCAACAACAGCAATTGCAGCAGCCTTTTGTGTTGAAGAAATCAAAGTATGTGATTCCAGCTCAAGAGCTTTTAAATGAGTTTTGTAATCTTGGAAATATTAGTGATAATAATAATAATAACAATAATGGAAGTTCGAAGAAGAAGGAACACAAAGGAATATGGAATGAAGGATGTTCATCTTCGTCGCTCTATACCATGGATCTTGGTGAACTTCAAAAGAGAAAGGCTAAACTTCAGTCCATGCTTGAGGAGGTGAGTATTAAACATACACAATATATTATACATCGTTTATGCAAAAAGAATTCTCCTATATAAAATCATGGTTAATAAATGATTAGTTTTTTGTTTGAGTTGTCCGATTCTTTGTTATTCATATTTGTTAATTTCTCAATGTAATGTTTTTTAACAAAAATAAATATATTCAGGTTTAAAACAATATGAAAGTGAAGAAATAAGAAAATGCTAATTAAAAGGGTATGTAACAAATAAAGACAAGTAATTCTTGTAATATTGCAATTATTAAATTTGATTGGTATGGGAGAGCTTGAAATCAGAATTCAATAATGTGAGAATAGACAACTACCATAAAAGAGATACCACTACAAGTTGAAGACAGATATATTGACAGTTTATAGCTTTCCCTTTACTTTTAGAAACCTCTATTCTTTTACTTTACATGGTCATCTAAATCAGCCTGAGCTACTTAGTTAGCCCTACCATTCTTCATATACATATCTTCCTTCATTAAATGGAACCCACCAAATCACCCTGTTTATATGTCAACAATCATCAGTACGTACCTATCTCTAAGCTAAATGATATTTGCTAGTAATATATCTACAATATTGACATTATTCTCATATGATGCATATAATTATGTTACCATGCGAAGTATATCAATCCTCACACACTTACTCATTATGTAGCCATATTACCAGAGATATAAATAGAGACTGAATACAGACATATAATATGTTCTTATTTGTTGCCTATAAGCAAAACTTGGAAAGATAATCTACGTTAATTTATCCACTTGACAAGGTTCTGGCAGCTAGCAATTATAGATCGATCCATCTCTATAAGCATCTTGAATTAGAAACTAGTAATAGATCCTCAATTACTCGTCATATATAACATTTAGCTCATAATCAAAATGTTATTGCATATTTGTGTGTTTGTGTGTACACGTACATGCATGCCTATGTGTGTAAATGTACATGCGGACACACATATGTATATAATTATAAACCTTAAGGTGTTTTTTAGTTTACATATGCAATAAATTATAAATATACATAGCCCTAAAGTATAGGTTTATGAATGCCTTTCAGGAAAGGAATCGTTTTTCTTCTTCTTTCTTTTCTTTCTTAATTAATACTTTTTGACTCGCATCTCCAGGTTCACAGAAGATACAGAAGATACTGTGATGAAATGAGGTCAGTAGTTTCCGCCTTTGAAGCAATAGCAGGCGAAAACTCAGCAAACGTGTATGCAACTCTAGCATCAAAAGCAATGTCGAGGCATTTTCGATGCTTAAAAGATGGAATTACAGGTCAACTTCAGGCAACAAAAATGGCTCTAGGTGAAAGAGATGGTAATTCTAGCAGTAATAATGCAATTGCGCCAGGAACAACTAGAGGTGAAACTCCTAGACTGAAAAGGTTGGAGCAATGTCTTAGGCAACAAAAAGCTTTTCATCAGGCAGCAATTATGGAGAGCCAGCCATGGCGGCCTCAGAGGGGCCTACCTGAACGCTCCGTTTCTGTTCTTAGGGCTTGGTTATTCGAACATTTCCTCCATCCGTAATAATTAAATCTCTCTATATATATCCCTATTTCTTAACCTAAGAATATTATTATATGGAAAAACATATATATCTTCATCCTTGTAGCTTCCAGTCATTTCATATAGTATTAGAAGTGTCGATATTCTCACTTCATTTGCATGATATGATCAGTGTCTGCACAAGACATCATTTTCTATGTCAGTAGACAAGAAACATTCTTCAAATACAAAGAACAAGTCTATAATTAAATCAAAATCCTGGCTATAGTTTAACAAGAAACAATAGCATGTATGCAATGTATACAATTAACTAATCTTGTTTTTGCTTTCCTTTTCAATATACATTAGGTTGCTTGCTTCATCATCTAATGTAAAATGAATGAGGTTCAACATTTCTCTTTCATGCTTTAAAGACGATGTATATGAATATTAACCTCACTGAGAATTTCAGTATATAATATCATTATAATGTGGAAGAAACTAAGAAAGACTTAGACCCTGTCAACAGACAACTAAAATAAATATATCTAACAGCTGTTAGCTAGCCTCGAAATATTTAAAAAAAAAATATCATCTGATCTTATTCATCAAATTGTTGTTGGACTAAATTGATTTTGTAATTAAAAACAGGTATCCAAGCGACGTCGACAAGCATATTTTAGCCAGACAAACAGGTCTCTCTAGAAGCCAGGTATTATATGTATAATCATACAAACCCTAACATCCCTTTCTATGACCCATCAAGCAATTAATTCCAAAATTTATACTCGTTATACTCTTAGTTTATTCATGAACGGTACCATGCATACATTTTTCTGATTACATTATTTCGAATGATTACAATATTATAATAAATTTTTTAGTGATTTTATAAACAAAGATGCATTATTCCACTTTACAAATTGCTAGCATCGTATATAGTTTGATCACCAATAAAGGTTAGCTAGCAAAGATTGAGTTGAATTTCAACTATCCGTACAGTAGTCTTCTTAATTCAATAGAGAATTATAAATATGTAGTCTTAATTTCTCTGTTGAATATATGATTTGACCTATTGGACTTCATCTATCAACGATAATTTATATTTTCTTTCAAAAGCCATGTTTCGGTAGTAGTGATCAATGTGATGCAATCTTACAATTATTTAACAGAATTTTCTTACTTTTATTTGTTTGAGTAGTCCTAAATGCACCCCAATTATCTTTTCATTTTGCTCAATCTTCAATTTATCCACGTCAATTCTTTTACTCACTTCATTTTACCCAATATGTTACTGGTCGGCACTGTGTTGGGGATCGAATAGCATTTCGGCTACAATCTGTTACTGGTCGGTTATATGTTACTGGTCGGTAATAAATTACTATTTGAACTGAACAATATTTAGTACTACGTTGCTTTTTTTTTGTGTTGCTAAAGGCATCCGGATCCTCTTTCTAATACCATAAAAAAATGCAATAACATTTGTATGCTTTCTTATACCAAAGTTATTTCACACGGCATTCAACCACCACGTAAAGTCGTTTTACACGGGAAACAATCACCGACCAACACTATTTTCCATAACAATCAATCATCGAACTGCTGTTGTTCGATGGTTAATCGCCATGAAAAATAACGTTGATCGACGGTTGTTCGTCATGCAAAAAAAAGTCGAAAATAATGTTGTTGGTAGTCCCTTAAAAAGTTTGGTATTATGAAGAGTATAATGTAAAAATTTGTGTTATTTTTTAGTAATAGTATCATGAAGAAGAAAATGAAATGACTTTAGCAATACACTTTTTTTCTTTTTTTCTTTTATTCTTCTTTAATTTGAGTAAAAAAAAGTAAACTTTGGGTTGCATTTAGCGCTGCTCACTGTCTTTTTTTTCCTTTCTGGCAACATATTTATTACATCAAATATTCTGATAACGTCTAAAAATGAATTTTAGGTGTCCAATTGGTTCATAAATGCAAGAGTGAGACTATGGAAGCCAATGGTAGAAGAGATGTACTTGGAAGAATTAAAAGAGGAAGGAAATTTGAACCCTAACACGAACCCTAGTTCCCCTCAAGTTCAATTAGAGGATCAAAAGCCTGTGTCTGGCTTTCATATCAACAATGATTCAGACTCCCTCTCTTCGATCATTAACAACAATCGAAACCCTAACACAAACAACAATCCTAATTTTGGAGTTGTTGATTTGGATTTCTCATCATACAATGCAAGCAATGATGTCTCGCTTACACTGGGATTGCAGCAACAGGAGCAATCTCTTCTCTTCTCTAGAGAAGACGATGATGACAGAGGGGTTCAATTTTCTGTTTTAGACGATGAAGAACAAAATCTGATGCAACACAGGAATTTCATGGGTGCTCAGTTGCTACATGATTTGATATGAATTGTGATAAGATAACAACAAGCATATTGCTTCACTTATTTTGGTTTAGTTAATAATATGTAGTGAATATTGTAGTTTGGTATATAAATTTCAAGTGATGGGTTGACGTAGGTTGTGGTATCAATGTTAATGAATAAACATACTTGTACAAACAGGTGTTTGACAGCTATATACAAACTACTTTCATGTTTGGTACTGATTAAATTTGATTTCAATTATTTAGGTGATTTAAAGTATCACTGTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244933.1	2.7e-132	homeobox protein BEL1 homolog
Swissprot	Q38897.2	1.8e-85	Homeobox protein BEL1 homolog
trEMBL	A0A6I9S031	6.8e-114	homeobox protein BEL1 homolog

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G41410.1	46.26	1e-94	343	BEL1	POX (plant homeobox) family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G06301	AT5G41410.1	441	155	11	82	461	192	611	46.26	1e-94	343
AfisC1G06301	AT2G23760.3	260	101	3	82	333	236	491	56.54	4e-80	295
AfisC1G06301	AT2G23760.2	260	101	3	82	333	236	491	56.54	4e-80	295

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07526.8	POX	Domain	83	208	147.1	4.3e-43
PF05920.8	Homeobox_KN	Family	284	323	64.4	5.6e-18

Gene Ontology

Accession	Ontology	Name
GO:0000978	F	RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077	F	transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0001525	P	angiogenesis
GO:0001752	P	compound eye photoreceptor fate commitment
GO:0002089	P	lens morphogenesis in camera-type eye
GO:0003682	F	chromatin binding
GO:0003705	F	transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
GO:0005829	C	cytosol
GO:0005634	C	nucleus
GO:0005667	C	transcription factor complex
GO:0007383	P	specification of segmental identity, antennal segment
GO:0007420	P	brain development
GO:0007422	P	peripheral nervous system development
GO:0007432	P	salivary gland boundary specification
GO:0007476	P	imaginal disc-derived wing morphogenesis
GO:0007479	P	leg disc proximal/distal pattern formation
GO:0007480	P	imaginal disc-derived leg morphogenesis
GO:0007525	P	somatic muscle development
GO:0007626	P	locomotory behavior
GO:0008134	F	transcription factor binding
GO:0008285	P	negative regulation of cell proliferation
GO:0009610	P	response to symbiotic fungus
GO:0009640	P	photomorphogenesis
GO:0009737	P	response to abscisic acid
GO:0010051	P	xylem and phloem pattern formation
GO:0010076	P	maintenance of floral meristem identity
GO:0010077	P	maintenance of inflorescence meristem identity
GO:0010089	P	xylem development
GO:0010092	P	specification of organ identity
GO:0010154	P	fruit development
GO:0010197	P	polar nucleus fusion
GO:0010201	P	response to continuous far red light stimulus by the high-irradiance response system
GO:0010223	P	secondary shoot formation
GO:0010227	P	floral organ abscission
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0010371	P	regulation of gibberellin biosynthetic process
GO:0014036	P	neural crest cell fate specification
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0034504	P	protein localization to nucleus
GO:0035326	F	enhancer binding
GO:0035855	P	megakaryocyte development
GO:0042659	P	regulation of cell fate specification
GO:0042803	F	protein homodimerization activity
GO:0045638	P	negative regulation of myeloid cell differentiation
GO:0045665	P	negative regulation of neuron differentiation
GO:0045944	P	positive regulation of transcription from RNA polymerase II promoter
GO:0046982	F	protein heterodimerization activity
GO:0048457	P	floral whorl morphogenesis
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0048735	P	haltere morphogenesis
GO:0060216	P	definitive hemopoiesis
GO:0060323	P	head morphogenesis
GO:0072002	P	Malpighian tubule development
GO:0080006	P	internode patterning
GO:0090098	P	positive regulation of decapentaplegic signaling pathway
GO:0090470	P	shoot organ boundary specification

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network