result

Gene information

Detail information of AfisC1G06412

Location

Gene	Chr	Start	End	Strand
AfisC1G06412	chr1	1160268919	1160272529	-

Sequences

CDS

>AfisC1G06412
ATGTATGTTTTATTCATTTTCATGTTACTACTTCATTCATCTTTATCGGACACCTCAGACTTCGCCGCACCCTACAAACCCAGAGAGCACATCCTCCTGAACTGCGGCGTTTCTGGCTCCATTGAATCCTCCCCAGGCCTCAAATGGTCAGGCGACGTGGGCTCCAAATACAACCCGGCCCTCACTTCTTTGGGTTTTCCCGCTTCCTACATGGACTCGGGAACCCCTACAATCCCATACCAGACGGCTCGCATCTTCTCCACTCCCTTTACTTACACCTTCCCCCTTGACCCTGGCCGTAAGTTCCTAAGACTCCACTTCTACCCTTCCAACTACACCAATCTCCACGCGTCCGACGCTAGGTTTTCCGTAACCGCCGGCCCCACCACCCTTCTCAGCAACTTCAGTGCCGACCAAACTGCAAAGGCATTAAACTATGCCTTCTTGGTGTTCGAATACTCCTTAAACGTGTCTGCTTCCAATCTCTCTTTGACTTTCGTGCCATCCAAGGATAAAGATTACCCTAATTCCTACGCTTTTGTTAATGGAATCGAGATCCTGTCCCTTCCGGATATGTTTCCGAACGAAGCAGAGCTTGTGAACGGAGCTGCAACGTATCCGTACACGATCGAGCCCGATTGGGCCCTTCAGACCGTATACAGACTCAACGTGGGAGGAGGGGCGATTACTGCGAATCAAGATTCGGGTTTGTTCCGAGCCTGGTCTGATGATTCCAACTACATTTACGGAGCAGCTTTTGGAGTTACGTACTTCAAAGACCCGAACGTAACATTAATCAAGTATTCAGCAAATTTGCGTGCCTATATTGCGCCAGAAAAAGTTTACGCAACTGCTAGATCAATGGGTCCTACCGTCTCGATAAATCGAAACTATAACTTGACCTGGATTCTTTCAGTGGATGCAGGCTTCTATTACGTGGTCAGGCTTCATTTTTGCGAAATGACATATCCGATAACCATGCCTAACATGAGAGTTTTTACGATTTATATCAACAACCAAACAGCTAAGATAGACGCGGATGTCATTGTATGGACCAAAGGGATCGGTGTTCCTTACTATGTCGATTATGTGGTTCCTACGATTGGCACCGGTATGGTAGATTTGTGGGTCGCCTTGCATCCGAACGAGAGATCAAAACCTCAGTATGTTGATGCTTTGTTGAATGGTCTCGAAGTGTTCAAACTCGAAGACACAAGCAATCACAGCCTAGCTGGCATGAATCCCGATTATTTGCCCGAGTCAAACGTCGACTATGACAGAGTGTTCAACAATCCAAAACGGAAATCTAAAAGCACTATAGGCGGAATCGTTGGCGGCGCATTTGGCTTTATCGTCGTCATAATAAGTTTGTTGATATTCGTTGCTTGTAAAAAGAAAAAGCAAGTCAAAGCAAAGGGTGCTCGATCGACTGACTGGCTACCGATATCTTTGTACGGCAACTCGAACTCCGGAAAAACCAACACAACCGGAAGCGTCGGGTCTTCCGTTCTGTCCAGTTTATCCCGGTACTTCTCCTTTGCAGAGATCGAGGATGCAACCAACGGATTCGACGAAGCATTGCTTCTTGGAGTAGGAGGTTTTGGAAAAGTGTACAAAGGTCAAATTGATAACGGGTCGGTAAAGGTTGCGATAAAGAGAGGGAACCCGACGTCAGACCAAGGCGCTCATGAGTTCCGCACTGAGATCGAGATGCTCTCCAAGCTCCGGCACCGCCATTTGGTTTCCCTCATCGGGTTCTGTGAGGAGAACGACGAGATGATATTGGTGTATGACTACATGGCCCATGGCACTCTGCGCGAGCATCTGTACAAAACTAAGAACAAGCCCCTGTCGTGGAGGCAGCGCTTGGAGATCTGCATAGGCGCGGCCCGTGGGTTGCACTACCTTCACACTGGGGCCAAGCACACGATTATTCACCGTGATGTGAAGACGACCAATATCTTATTGGATGAGAAGTGGGTTGCGAAGGTTTCGGATTTCGGGCTTTCGAAAACGGGTCCAATGCTCGACAACACGCATGTCAGTACGGTTGTGAAAGGAAGTTTCGGGTACTTGGACCCGGAGTATTTTCTGCGTCAGCAGTTGACGGATAAATCGGATGTGTACTCTTTTGGGGTTGTTTTATTTGAGATTTTGTGCGCCCGACCGGCATTGAACCCTGGTCTATCAAAAGAGCAGGTAAGTATTGTTGATTGGGCGCGGCATTGTCTGAAGAAAGGCATGATCGATCAGCTGGTGGACCCATACCTGCAAGGGAAGATATCTTCTCAGTGTCTGAAGAAGTTTACAGAGACGGCGGAAAAATGTGTGTTGGAGCAGGGGATCGAGAGACCGTCTATGGGGGATGTGCTTTGGAGTCTGGAGTTTGCGCTTCAGCTACAGGAGAGCGCGGAAGAAAGCGGAGGGTTTGGGGACAGTGGGGATGAGGCTGCTCCGTTGATGAAGGGAGGGAAGAAAGATTTGAAAAATGAGATGTTATTGGAATCGGATTCGATTACTACTACCACGAGTATGACTATGACTACTAGTAGTAATGCTTCAGGCAGTAGCACTGATAGTCGGAGTTTCAATAGTGGGAAGTTGGATGAATTGACTTCTAGCGCTGTTGTGTTTTCTCAGATCATGAATCCCGAAGGGAGATAA

Protein

Gene

>AfisC1G06412
CTTTTCGCATTGACCAGACTTCCAACTACTTGGAGTCTTTGTTTTGAGCCAACAGTCACGAAAATTGGTCTTTTGTGCAAATATGACAGACCCACTGACCAAACTGTACTGTTTATCTAAATTATTGCTAACTGTAATCAAACATATTTATTCTTTCCATGTTCATACTCACTTTACTCTTTTCCCCACTCTTCGATTTCATTCTTCTTTTTCTGGCATTTTCCTCTAATTTGAAAGTATCTTTATCTGCAGTTGATTTTTCCTGTTTTTCAGCAGATTGTCTGCCCATATTTCTTCAACTTACAAATCGATTTTTCTTTCCGTTTTGCAGGTTATAATCTGCTCAGATCTATCATTTATCAGAATCTGCTGGAATGTATGTTTTATTCATTTTCATGTTACTACTTCATTCATCTTTATCGGACACCTCAGACTTCGCCGCACCCTACAAACCCAGAGAGCACATCCTCCTGAACTGCGGCGTTTCTGGCTCCATTGAATCCTCCCCAGGCCTCAAATGGTCAGGCGACGTGGGCTCCAAATACAACCCGGCCCTCACTTCTTTGGGTTTTCCCGCTTCCTACATGGACTCGGGAACCCCTACAATCCCATACCAGACGGCTCGCATCTTCTCCACTCCCTTTACTTACACCTTCCCCCTTGACCCTGGCCGTAAGTTCCTAAGACTCCACTTCTACCCTTCCAACTACACCAATCTCCACGCGTCCGACGCTAGGTTTTCCGTAACCGCCGGCCCCACCACCCTTCTCAGCAACTTCAGTGCCGACCAAACTGCAAAGGCATTAAACTATGCCTTCTTGGTGTTCGAATACTCCTTAAACGTGTCTGCTTCCAATCTCTCTTTGACTTTCGTGCCATCCAAGGATAAAGATTACCCTAATTCCTACGCTTTTGTTAATGGAATCGAGATCCTGTCCCTTCCGGATATGTTTCCGAACGAAGCAGAGCTTGTGAACGGAGCTGCAACGTATCCGTACACGATCGAGCCCGATTGGGCCCTTCAGACCGTATACAGACTCAACGTGGGAGGAGGGGCGATTACTGCGAATCAAGATTCGGGTTTGTTCCGAGCCTGGTCTGATGATTCCAACTACATTTACGGAGCAGCTTTTGGAGTTACGTACTTCAAAGACCCGAACGTAACATTAATCAAGTATTCAGCAAATTTGCGTGCCTATATTGCGCCAGAAAAAGTTTACGCAACTGCTAGATCAATGGGTCCTACCGTCTCGATAAATCGAAACTATAACTTGACCTGGATTCTTTCAGTGGATGCAGGCTTCTATTACGTGGTCAGGCTTCATTTTTGCGAAATGACATATCCGATAACCATGCCTAACATGAGAGTTTTTACGATTTATATCAACAACCAAACAGCTAAGATAGACGCGGATGTCATTGTATGGACCAAAGGGATCGGTGTTCCTTACTATGTCGATTATGTGGTTCCTACGATTGGCACCGGTATGGTAGATTTGTGGGTCGCCTTGCATCCGAACGAGAGATCAAAACCTCAGTATGTTGATGCTTTGTTGAATGGTCTCGAAGTGTTCAAACTCGAAGACACAAGCAATCACAGCCTAGCTGGCATGAATCCCGATTATTTGCCCGAGTCAAACGTCGACTATGACAGAGTGTTCAACAATCCAAAACGGAAATCTAAAAGCACTATAGGCGGAATCGTTGGCGGCGCATTTGGCTTTATCGTCGTCATAATAAGTTTGTTGATATTCGTTGCTTGTAAAAAGAAAAAGCAAGTCAAAGCAAAGGGTGCTCGATCGACTGACTGGCTACCGATATCTTTGTACGGCAACTCGAACTCCGGAAAAACCAACACAACCGGAAGCGTCGGGTCTTCCGTTCTGTCCAGTTTATCCCGGTACTTCTCCTTTGCAGAGATCGAGGATGCAACCAACGGATTCGACGAAGCATTGCTTCTTGGAGTAGGAGGTTTTGGAAAAGTGTACAAAGGTCAAATTGATAACGGGTCGGTAAAGGTTGCGATAAAGAGAGGGAACCCGACGTCAGACCAAGGCGCTCATGAGTTCCGCACTGAGATCGAGATGCTCTCCAAGCTCCGGCACCGCCATTTGGTTTCCCTCATCGGGTTCTGTGAGGAGAACGACGAGATGATATTGGTGTATGACTACATGGCCCATGGCACTCTGCGCGAGCATCTGTACAAAACTAAGAACAAGCCCCTGTCGTGGAGGCAGCGCTTGGAGATCTGCATAGGCGCGGCCCGTGGGTTGCACTACCTTCACACTGGGGCCAAGCACACGATTATTCACCGTGATGTGAAGACGACCAATATCTTATTGGATGAGAAGTGGGTTGCGAAGGTTTCGGATTTCGGGCTTTCGAAAACGGGTCCAATGCTCGACAACACGCATGTCAGTACGGTTGTGAAAGGAAGTTTCGGGTACTTGGACCCGGAGTATTTTCTGCGTCAGCAGTTGACGGATAAATCGGATGTGTACTCTTTTGGGGTTGTTTTATTTGAGATTTTGTGCGCCCGACCGGCATTGAACCCTGGTCTATCAAAAGAGCAGGTAAGTATTGTTGATTGGGCGCGGCATTGTCTGAAGAAAGGCATGATCGATCAGCTGGTGGACCCATACCTGCAAGGGAAGATATCTTCTCAGTGTCTGAAGAAGTTTACAGAGACGGCGGAAAAATGTGTGTTGGAGCAGGGGATCGAGAGACCGTCTATGGGGGATGTGCTTTGGAGTCTGGAGTTTGCGCTTCAGCTACAGGAGAGCGCGGAAGAAAGCGGAGGGTTTGGGGACAGTGGGGATGAGGCTGCTCCGTTGATGAAGGGAGGGAAGAAAGATTTGAAAAATGAGATGTTATTGGAATCGGATTCGATTACTACTACCACGAGTATGACTATGACTACTAGTAGTAATGCTTCAGGCAGTAGCACTGATAGTCGGAGTTTCAATAGTGGGAAGTTGGATGAATTGACTTCTAGCGCTGTTGTGTTTTCTCAGATCATGAATCCCGAAGGGAGATAAAGTGTGTTATCTGTTATTGAAAACGTGGGTATATCTTTGATGGATTTGTTGTGTAATATTATTGAGAACATGGGTTAATCCATGCTTATAATTAGGAGCCCATGCGTGCTGTATAATACTGATGTGTGTTGGTTACTTTTTATGGACTGGTCGCCAGTTTCTTTGCTGTTTAACTACCCAGTTACCATTCTACTATCACAGCTTTTCTTACTTAGCATTATATCTGCATGTATATCTTCTCCTACTTCTATCTTGTAATAATTAACATTTTGACAAAATAAAGGTGTTCATTTTAAGTAATACCTAAAATATTTTTCATCTAGTATTATAGTATGATGTTCTGATTTGTCCAAATGCCACAAATGCGGAGCTTGATTGGAAACTATTCCTATGTTAAAATTAGAAAAAAAATCATGATATTATATATGATTGGCCTTTGTAAATTATCGTGATAATCATCTACATAACTTAAAATTCTTGTTCATTTATCCAGATGTAAAATGCACACATAGACACATGAATATACATAAAAGTAGGTGTGTACTATTTAGTTTAATACGACCAAGGTTTTAC

Functional annotation

Database	accession number	e-value	annotation
nr	OAY65008.1	0.0e+00	Receptor-like protein kinase FERONIA, partial
Swissprot	Q9SCZ4.1	5.4e-288	Protein SIRENE
trEMBL	A0A8K0N0Q1	0.0e+00	Receptor-like protein kinase FERONIA

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G51550.1	60.23	0.0	1009	FER	Malectin/receptor-like protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC1G06412	AT3G51550.1	880	325	14	22	887	27	895	60.23	1009
AfisC1G06412	AT5G28680.1	905	391	24	2	887	11	858	48.40	776
AfisC1G06412	AT3G04690.1	876	377	24	29	887	27	850	49.09	770

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF12819.4	Malectin_like	Domain	33	401	112.8	1.7e-32
PF07714.14	Pkinase_Tyr	Domain	529	790	169.1	9.5e-50

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0050832	P	defense response to fungus
GO:0005576	C	extracellular region
GO:0004672	F	protein kinase activity
GO:0009506	C	plasmodesma
GO:0009705	C	plant-type vacuole membrane
GO:0009723	P	response to ethylene
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009788	P	negative regulation of abscisic acid-activated signaling pathway
GO:0009791	P	post-embryonic development
GO:0009860	P	pollen tube growth
GO:0009941	C	chloroplast envelope
GO:0010483	P	pollen tube reception
GO:0016324	C	apical plasma membrane
GO:0030308	P	negative regulation of cell growth
GO:0043680	C	filiform apparatus
GO:0046777	P	protein autophosphorylation
GO:0051510	P	regulation of unidimensional cell growth
GO:0051924	P	regulation of calcium ion transport
GO:0080147	P	root hair cell development
GO:0090404	C	pollen tube tip
GO:0097275	P	cellular ammonia homeostasis

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network