result

Gene information

Detail information of AfisC1G06435

Location

Gene	Chr	Start	End	Strand
AfisC1G06435	chr1	1163964464	1163968283	+

Sequences

CDS

>AfisC1G06435
ATGGAGCTCCTTCTACTCGAAAAAACCCTCATCTCCCTCTTCTTCGCCATCACGCTAGCCATCGTCATCTCCAAACTCCGCGGCAAAAAATTCAAACTCCCTCCTGGGCCCCTCCCTGTCCCCATCTTCGGCAACTGGCTCCAAGTCGGCGACGATCTGAACCACCGAAACCTCACCAACTTCGCCAAAAGGTTCGGAGACATTTTCCTTCTTCGGATGGGGCAGAGAAATCTCGTTGTCGTCTCCTCCCCTGATCTCGCCAGAGATGTTTTGCACACTCAAGGTGTGGAGTTCGGATCCAGGACCCGAAATGTTGTTTTTGATATATTCACTGGAAAAGGGCAGGATATGGTTTTCACTGTTTACGGTGAGCACTGGAGGAAGATGAGACGGATTATGACTGTTCCTTTCTTCACCAATAAAGTAGTCAATCAGTACAGGTATGGATGGGAAGATGAGGCAGGGAGAGTGGTGGAGGATGTGAAGAAGGATGCAAAGGCTGCGACCGAAGGGATAGTGTTGAGGAAGAGATTGCAGTTGATGATGTATAATAACATGTACAGGATTATGTTCGATAGAAGATTTGAGAGTGAGAACGATCCTTTGTTTTTGAAGTTGAAAGCTTTGAATGGAGAGAGGAGTAGACTGGCGCAGAGTTTTGAGTACAATTATGGTGATTTTATTCCTATTTTGAGACCCTTTTTGAGGGGTTACTTGAGGATTTGTAGGGAGGTTAAGGAGAGGAGGATTCAGTTGTTCAAGGATTACTTTCTTGAGGAGAGGAAGAAATTATCGAGCACAAAGGCAACCGACAATGCAGGCCTAAAGTGTGCAATTGACCACATACTGGATGCTGAGAAGAAAGGAGAAATCAATGAAGACAACGTCCTTTACATTGTGGAAAACATTAACGTTGCAGCAATCGAGACAACACTATGGTCAATAGAATGGGGCATAGCGGAACTGGTCAATCACCCCGAAATCCAGCGCAAACTCCAGCACGAACTGGACACCGTTCTCGGACCAGGTACCCAAATAACCGAACCCGACACCCACCGACTCCCGTACCTCCAAGCCGTGATCAAAGAAACCCTCCGCCTCCGCATGGCGATCCCTCTTCTAGTCCCCCACATGAACCTACACGATGCGAAATTAGGCGGGTACGATATTCCAGCGGAAAGCAAGATCCTGGTGAACGCATGGTGGCTGGCGAACAACCCGGCCCACTGGAAGGATCCGGAAGAGTTCAGACCCGAGAGGTTTCTAGAAGAGGAAGCGAAGGTCGAAGCTAATGGGAACGATTTCAGGTATATTCCCTTTGGGGTTGGGAGGAGGAGCTGTCCCGGGATTATACTGGCGTTGCCCATTTTGGGGATCACGATTGGGAGGCTGGTTCAGAATTTCGATTTGATGCCGCCGCCTGGGATGGACAAGATTGATACTGCCGAAAAGGGCGGGCAGTTTAGTCTTCATATTTTGAATCATTCTACTATTGTCGCTAAACCTAGAGTCTTTTAA

Protein

Gene

>AfisC1G06435
CACAGCCCTCACCTACTCCCCGTTTCTCACCCATCACCCCATTTATAAATATTTTACATCCCTCCCTCTTCCCACCATTCTCATCCACCAATTTCAAATACAGAAACATGGAGCTCCTTCTACTCGAAAAAACCCTCATCTCCCTCTTCTTCGCCATCACGCTAGCCATCGTCATCTCCAAACTCCGCGGCAAAAAATTCAAACTCCCTCCTGGGCCCCTCCCTGTCCCCATCTTCGGCAACTGGCTCCAAGTCGGCGACGATCTGAACCACCGAAACCTCACCAACTTCGCCAAAAGGTTCGGAGACATTTTCCTTCTTCGGATGGGGCAGAGAAATCTCGTTGTCGTCTCCTCCCCTGATCTCGCCAGAGATGTTTTGCACACTCAAGGTGTGGAGTTCGGATCCAGGACCCGAAATGTTGTTTTTGATATATTCACTGGAAAAGGGCAGGATATGGTTTTCACTGTTTACGGTGAGCACTGGAGGAAGATGAGACGGATTATGACTGTTCCTTTCTTCACCAATAAAGTAGTCAATCAGTACAGGTAACTTATATTCGAGTTTAGATTGGTTAAATGAAATTGTCACAGTGACTGATGATTTGATGTGTATTATTGGATTAGGTATGGATGGGAAGATGAGGCAGGGAGAGTGGTGGAGGATGTGAAGAAGGATGCAAAGGCTGCGACCGAAGGGATAGTGTTGAGGAAGAGATTGCAGTTGATGATGTATAATAACATGTACAGGATTATGTTCGATAGAAGATTTGAGAGTGAGAACGATCCTTTGTTTTTGAAGTTGAAAGCTTTGAATGGAGAGAGGAGTAGACTGGCGCAGAGTTTTGAGTACAATTATGGTGATTTTATTCCTATTTTGAGACCCTTTTTGAGGGGTTACTTGAGGATTTGTAGGGAGGTTAAGGAGAGGAGGATTCAGTTGTTCAAGGATTACTTTCTTGAGGAGAGGAAGTATGTCAATTTCTATAATTGTTTAATTATTACTGATTATTTTATAATTAATTCATCTGCATTGGATATCACTGTTGATCGTATAAAATAAATATATACGACACCATAAAATAATGTAACGAAAATCCTGAATCTTCTTGTTTGATACTGATTTGTATATAATGCTTGAAACGATAGGAAATTATCGAGCACAAAGGCAACCGACAATGCAGGCCTAAAGTGTGCAATTGACCACATACTGGATGCTGAGAAGAAAGGAGAAATCAATGAAGACAACGTCCTTTACATTGTGGAAAACATTAACGTTGCAGGTATCCTTCTTTGCACTAAAAGTTCTCTTCATATTTTTTTAAGTTCCATGTGTTTGCCATTTTTTTAGTCGGACAATAATTTTATTTAACTGTTGTTCTGGCTTTGACATCAATTCATTAAACCGAGAAAACTTGTGTTTGGACAAGAGAAATATCAAAATAAGTAGTTGTTTCATGAAGTACTTGATTTGTACCATGTTTCGTTATATTCCCTTCCCATTTGGAAAATATACGCATATGTAACATTAATAGACACACCTTTCCTTAGACGTGTAGGAATGTGTACTATCACGCATTTGTGCTATAAGCTATAACTAATCTTCTAAATAGCATGAATATAACTTAAATTGTTCCTTTTATCTCCCTTTAAAAATAAGTTTTAAGGACAGCATGAATATTTAATTTTATAGACAATTTATAGAAAAATGATAAATTCATTTAATTTTTTTAAAATATACAAAAAATGACAAATTCATTCATCATTGTTTTTATATAATTAAAAATGATAATATCATGTTTTTTTTTCTGTCCTTACAATTTATTACTCTTAACGAAGAAGAGCTTTGGTAGGTAAACAACTTAATCATGAGCAAGTTGTACTTGGCCATCACTGCAGTCACATGTTTGTCGTTGATGAGTTGGTGTGTTCATCTAACATTAGCTAGGCTCTTTTTGACAAATTTTGGTTGTAGGATTATTCCAAATTGATCTATATCAGTTGAGTTTTTATTATCACATATCTACTGCTTGCCTTATCCGAACTCAAGGAGCTCATGCTGACATATATATAATAAAGGTCAATATGTTTTTAACAAAATTATAGTACGAAACTGTATGAAATTATGTATCCATTCGTAGAATGGAGTTGTTGTCTAATAATTGTAAATGTCTATCGTGATGCTAAAATTTTAAACATGGAAAGTAATCCGATAATTTGGTTTCAATCAAAGAAGATGATAACCATTTTATTTATTTAGACCATTAAACCCAAATCAGGATAAACTTGTCTGCACAATGTTACACATTTTAATTTCGTTGCTATCGGAATACACGATTGGTGGCGTGTCTTATATTCTATGCCCTTTAGCTTAGCAGACGCCCACTTGGCATTTATTGTGTATGAAGTTGTTAATGTGTATTTAAGCTCAGCTACGTGTTCCATAGTTGTGCATCTTAGTGGCTTCGAATCTATTGGTCGATGTATATTTTACAACTATTTGGTAGTCTTCTCTTCTTCTTTTTTTTACTTATATTTGGTCACGTTACAACCAACTATGCTGATTGCTGATTTGCCCAGATATATTTTGTATATACAAAAGTTTAACAAAACCTTCTATTAAAGAGAAGTTTCCTATGATATCACATATGTCATCTTTATACATCATCAAGTTAGATACTAATTTCAGTCCATTAAAATGATCCCTTTTAATCCATTCGAATATCCACCTCCTATCTTAAATTAATAGCAAATCCCACATCTGCGAAAAAAGTAGACAGGCTGTTAACCTTAAATAGTTTTGGGTACCAGATATTCATCTGCACTCTAACTACGTAGCACGCCAAATACCACAAATTATTCTATGATGCAACTGCTACTTTTACCGATCAATCATTGACTAATGCAATCAATTGTCGCTTGCATCTTCAGAAGGAATAAATGCGTATGAAATCTGAAACTTACCATGTAGTAAAATGAAAAATTGCAGCAATCGAGACAACACTATGGTCAATAGAATGGGGCATAGCGGAACTGGTCAATCACCCCGAAATCCAGCGCAAACTCCAGCACGAACTGGACACCGTTCTCGGACCAGGTACCCAAATAACCGAACCCGACACCCACCGACTCCCGTACCTCCAAGCCGTGATCAAAGAAACCCTCCGCCTCCGCATGGCGATCCCTCTTCTAGTCCCCCACATGAACCTACACGATGCGAAATTAGGCGGGTACGATATTCCAGCGGAAAGCAAGATCCTGGTGAACGCATGGTGGCTGGCGAACAACCCGGCCCACTGGAAGGATCCGGAAGAGTTCAGACCCGAGAGGTTTCTAGAAGAGGAAGCGAAGGTCGAAGCTAATGGGAACGATTTCAGGTATATTCCCTTTGGGGTTGGGAGGAGGAGCTGTCCCGGGATTATACTGGCGTTGCCCATTTTGGGGATCACGATTGGGAGGCTGGTTCAGAATTTCGATTTGATGCCGCCGCCTGGGATGGACAAGATTGATACTGCCGAAAAGGGCGGGCAGTTTAGTCTTCATATTTTGAATCATTCTACTATTGTCGCTAAACCTAGAGTCTTTTAATTCGTGCTTCTTTTTTTTTTTTGGTTGCTTGCAAGTTCTCTGCTTGAAAATGATTTGGGCAAAGGATTGGACTGTATACTATGAAAATACTACGATGATTATTAGATGAATGAATTATGTATTATATCTTGTACTTTCCTCAAGTTTAATGGGTATTATCATATTTTGAATTGATGAAGCAAACGATACATGGTTGTTATTCAAATGGACTTCTAGGATCGGATACCCATTAAT

Functional annotation

Database	accession number	e-value	annotation
nr	AAS48416.1	7.3e-293	cinammate 4-hydroxylase
Swissprot	Q43054.1	6.5e-270	Cytochrome P450C4H
trEMBL	Q6QHK2	5.3e-293	Cinammate 4-hydroxylase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G30490.1	84.69	0.0	879	ATC4H;C4H;CYP73A5;REF3	cinnamate-4-hydroxylase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G06435	AT2G30490.1	503	77	0	1	503	1	503	84.69	0.0	879
AfisC1G06435	AT2G40890.1	505	302	10	13	504	5	496	35.05	3e-76	283
AfisC1G06435	AT4G13770.1	499	310	11	16	499	13	495	31.66	1e-66	250

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	34	495	390.2	1.1e-116

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0005576	C	extracellular region
GO:0005783	C	endoplasmic reticulum
GO:0005506	F	iron ion binding
GO:0005774	C	vacuolar membrane
GO:0005794	C	Golgi apparatus
GO:0055114	P	oxidation-reduction process
GO:0006744	P	ubiquinone biosynthetic process
GO:0040007	P	growth
GO:0042802	F	identical protein binding
GO:0009416	P	response to light stimulus
GO:0009505	C	plant-type cell wall
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009611	P	response to wounding
GO:0009699	P	phenylpropanoid biosynthetic process
GO:0009808	P	lignin metabolic process
GO:0016710	F	trans-cinnamate 4-monooxygenase activity
GO:0020037	F	heme binding
GO:0080167	P	response to karrikin

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00487	CYP73A; trans-cinnamate 4-monooxygenase	EC:1.14.14.91	Ubiquinone and other terpenoid-quinone biosynthesis	ko00130
			Phenylpropanoid biosynthesis	ko00940
			Stilbenoid, diarylheptanoid and gingerol biosynthesis	ko00945
			Flavonoid biosynthesis	ko00941

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network