Detail information of AfisC1G06478


Location
GeneChrStartEndStrand
AfisC1G06478chr111761385211176147867+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020273702.19.6e-130zinc finger CCCH domain-containing protein 11-like
SwissprotQ0JHZ2.23.1e-109Zinc finger CCCH domain-containing protein 11
trEMBLA0A5P1E9A36.9e-130C3H1-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G20280.174.181e-127 453Zinc finger C-x8-C-x5-C-x3-H type family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily9011323.24.2e-05
PF16543.2DFRP_CDomain21529972.13.6e-20

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0005739Cmitochondrion
GO:0046872Fmetal ion binding
GO:0005730Cnucleolus
GO:0044822Fpoly(A) RNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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