result

Gene information

Detail information of AfisC1G06591


Location
GeneChrStartEndStrand
AfisC1G06591chr111991425691199143163+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrMBA0622756.16.4e-26hypothetical protein
SwissprotQ9LTH4.12.1e-21Protein PHYTOCLOCK 1-like
trEMBLA0A7J8SB214.6e-26HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G59570.139.771e-23 105BOAHomeodomain-like superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag164502.t1
Allium fistulosumAfisC1G06591
Allium sativumAsa7G02913.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain7112125.31.1e-05

Gene Ontology
AccessionOntologyName
GO:0000156Fphosphorelay response regulator activity
GO:0000160Pphosphorelay signal transduction system
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0042802Fidentical protein binding
GO:0009409Presponse to cold
GO:0009414Presponse to water deprivation
GO:0009658Pchloroplast organization
GO:0009910Pnegative regulation of flower development
GO:0010082Pregulation of root meristem growth
GO:0010380Pregulation of chlorophyll biosynthetic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0031537Pregulation of anthocyanin metabolic process
GO:0042753Ppositive regulation of circadian rhythm
GO:0043565Fsequence-specific DNA binding
GO:0080022Pprimary root development
GO:0080036Pregulation of cytokinin-activated signaling pathway
GO:0080113Pregulation of seed growth
GO:1900056Pnegative regulation of leaf senescence

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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