result

Gene information

Detail information of AfisC1G06619

Location

Gene	Chr	Start	End	Strand
AfisC1G06619	chr1	1203596599	1203600578	-

Sequences

CDS

Protein

Gene

>AfisC1G06619
ATGCAGAAACATAGTCTTCGTCCCATCAACTCTAGCTCAAAAAAGTCAGATTACTCAAGATCATCAACTTCCAATGGAAGTCAGTCTGATTTTATTCACAGCGTAAAATCTTCTGAAGTAAAAGATTCCCAAGGATTTATCGGCTCGTTTATTGGTTGTTTTGTTCCCCACAAATCAACTGAAGAAGATGACGATGACAGTGGAAATGTTCCAACAGTTGATTCATTATCCAGTTATTCAGGTACTCTTAATATCGTAGACATAAATTTTTCTGTAAATTTGGAGTAGGGAGATTCAGACAGTTATATTCTGATTTTGCAGGGTCAAGAACATCCACTAGAAGCAGCAGCAGTCAATCTAGGCTTACCAAATTTAGCAGTTCCTACAGTGTCAGTGATGCAAAAGGGTCAACTGAATTCTCAATTCCCATCTTATGCAAGGCTACTAAAAATTTCTCTCCAGAAAATATAATCGGGGAGGGTGGTTTTGGTACTGTTTATAAAGGAAAGCTCAAGGATGGTGCTCTAATTTCTGTTAAGCGCGCCAAAAAGGTAACAAGAATTTGCTGCTTAATAACTTGACATCAGTAGGTGCTAATTTCATTTTTAATTCATCTTTTGATAGAATTTACTTCAGCATTTGTCATCTGAGTTCAAGACAGAAATCCAAATTTTTTCAAGAATAGACCATTTAAATTTGGTGAAATTTCTTGGTTTTATAGAGCAAGATGATGAAAGGTTAATTGTTGTTGAGTACGTCAGCAATGGAAATCTACGTGAACATCTAGATGGTCAGTACATATACATTTACTCTGTAAGATGGTACGATACTCTGATACATACAGAGAAGAAACTGTCTTGTTAGTAAAGCTTCATTGTGTACTGACTATTGAGAAACAATATAAAATGTAATTGTAATGCAGGCATTCACGGTGAAGTATTAGAGCTTGCAGCGCGGCTGGATATTGCCATAGATGTAGCTCATGCTATAACCTATTTGCACATGTATACAGGTATATATTTACGTGTAATCTCCACCCTGAGCTTAATATTTAAGGGAAAAAGAATTACAGAATAGAAAATCTCAAAATGTGTAGTGTGTACTGTAAACTATGCAGTGTTATTCATTTCCAGATATATTTTCTATTGTACCATAATTATCCGATAATTGAATTCTATTTGAGCTGCTTAAAGTTTAGCTACAGTGTTAATCAAATTAGACAATGGTTATTCATTTTCAGATCATCCGATAATCCATAGAGACATAAAAGCATCAAATATATTGATCACAGAGAATTTTAGGGCCAAAGTTTCTGATTTTGGATTTGCTCGCCTCATGTCTGATGACCTAGATGCTACCCATGTTTCGACACAAGTAAGAGGGACAGCTGGATATTTGGATCCAGAATATCTCAGTACATACCAACTCACTGAAAAGAGTGATGTTTACTCATTTGGAGTTTTACTTGTTGAGATGGTTACTGGAAGGAGACCCATTGATCGTAACAGAAATGTTAATGAAAGAAGAGCTGTTGTTTGGGTAAGTTATCTCTCCATGATCACATGTTTATGGTACCAAACCTGTCTAACGTAGCATTGTATAAGCCCTCTACGGGATTCAGACTCAGCTATTTATGTCTAAGCAAATTGGTAATTGATTTCTAAGGAATGCAAACCTCTAGATCCACTCTTTAGATGACTTACCAGACTAGTGGTCCTAGACTACATACACACATACACACACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTAAATCATCAAACTATGCACACTGCCAAGTTTAATTTATCAACCCACATTCAATATAATATTCAGCAAGCTCAACTTCACAAATATATTGAGAGCATGATCGGTAACTCTACATAAGTAGTCAAAACTACATGCGAGCGGCACGTTCCAGTTTAGGTATTTGGAAACTCCTCATAGCGAAGTAGCATAAATAACTTAGAATCAAGATTAGAGAAACAACTACTTGATTAGGAGTGAACAACTGGTTGGTTCAGTTTGAGACCGACAAAAATGTTAAAATCAAATTAACCATTTTAGAAACAAAAATCGAGTCAAACCAAACGGATATTTTGCAAAACCGAAACTAATTGATTCGGTTTTGTTGGTTTGATTGGTTGATGGCTAAATAACCTAGGTTCTGTAGTTGCTAGCATAACATAAGACTGAAATAACTGATTGAGTCCCCACGCACTAAGATGAATTGAAAGAACGAACAAAATTATTATATAATAATATAAACAATAGTAGTGACATTAATAACTATAGTCTTTTACAATAATTTATGTTTTATATTCCGTTCAATTGGTTGATCCGGTTTTTAAATATTGGAAACTGAAACTGATCAAAAATTGAATAAACTCAAAAACAGAAACCAAACTCAACCAAATAACTTGCAAAATCTAGCCAAACATACCAAATTTATTTGGTTCAGTTGATTTATTTGATTCAAACCAATAAATGCCAACTCTAATTTTGATCAAGTAGATGACTAAGTAACCTTGTTGTTTCAACAATTTATAAGTAAAACCATTTAATATTTATCATCATACCAACCGTTAGGATGGTTTGTCTACTTTGAATTTGCAACATCAATTTGTGTGAAGTAAAAAAAAACAAGTAACATGTGTTTAAAATGTCTCCTTAAATATTTTATTTTGTTTTTTTCCACAAACGTCTCATTAAGTTTCTCAAATTCATTTTTTTCTTCAACATATTATCATTTGATATTTAACTAAAATTAATGAAAAATTAAACTAAATATTTTTTCTCGAAAGTATGTAATTGAACGGTCATTCTCATCGTTATACGGTTGTACTAGTACTTTTACATGGATATGTCCAATAATGTATTTCGGCATGCACTCATTACTTACAAGTCATGATAGTCAAACACTAAAATTAACTTATTTTAACTTAAATGTCAAATTACATCAAGACATTTTGCTCATTGTCATTCAATCAAAACTATTTAAAAATTAATATTTAAAGCTCTATTTAAGAAGATCTAAAGTAAGTGGTTTTGAAACAAGCTCTAGCTCATCTCCAAAGGTCTAATACAAAGTACAGCTTTGGTCAATGCCATGTATTTTCTGCCGTTATATAGCCCTTCATTACTCACCTACAATAGTATGGAAATCAGTATAAGTTTAAATGGGAGTGGGTAAAGAATGATTAACAAATTCTTCAAATAAAGCCAAATTATTTGTTGGCAACACTATCAGAAACTCAAGGCATTTGAATAATGCATGTACTTCCAGAATTATCTGGGTTATTGCACAGAAAAATGCATAAATACTCCTAAACTCTTCAGTATGGATCTGAGGGTATGTTTGATCGATTTGGCATAGGATAATCTCTCTATTTTGAAACAAACTCGGAGAACTCATAGTATGGCATGTATTATAATTAGGTGCAAACATGTACTGTGATTCTACTTCTTTTCTGAAGTCCAAAATTTGCAGGCAATACAGAAATTGAGAGAAGGAGAAGCCGTGGTGGCAATGGATCCAAGACTGAGGAGGAGTCCAGCATCTGTAACCGCAATTGAGAAAATGCTCAAGTTGGCTGCAGCATGCACCGCCACATCAAGAAAATCTCGGCCGTCTATGAATAAATGTGCAGAGGTTTTATGGAGAATCAGAAAAGATTATGGGGATATGCAGTCCGTTCAGAAATAGTTATACCTGCAGTGCAATGATTGTGTTAATATGTTTGCTTTGAATCTGCATCCTCTGTATATATTTTTCTGTGCATGTTAGAAATAGAACATGTTAGAATGAAATCAATAAATAGTCCTTGGATTTAAAATTTTACGGTTTGTAGAAGTCAAGTTGGATTTAAAATTTTACAGTTTGTAGAAATCAAGTTTCCGAAAAAGTTACTTGCCAAGAAGAAAGAGTTTGTAATATGCACTATACTAATGAGGGGTTGTGTAAAACACACTTATTATTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020274830.1	8.7e-135	calmodulin-binding receptor-like cytoplasmic kinase 2
Swissprot	Q8VZJ9.1	1.6e-101	Calmodulin-binding receptor-like cytoplasmic kinase 2
trEMBL	A0A5P1E842	6.3e-135	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G00330.1	54.79	1e-110	396	CRCK2	calmodulin-binding receptor-like cytoplasmic kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G06619	AT4G00330.1	365	151	3	48	408	52	406	54.79	1e-110	396
AfisC1G06619	AT5G58940.1	426	192	7	1	404	3	427	49.53	2e-108	389
AfisC1G06619	AT2G11520.1	334	168	2	75	405	172	504	48.50	4e-89	325

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	129	397	172.2	1.2e-50

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0042742	P	defense response to bacterium
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0005516	F	calmodulin binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0009409	P	response to cold
GO:0009555	P	pollen development
GO:0009651	P	response to salt stress
GO:0009737	P	response to abscisic acid
GO:0009741	P	response to brassinosteroid
GO:0009826	P	unidimensional cell growth
GO:0016310	P	phosphorylation
GO:0019901	F	protein kinase binding
GO:0042542	P	response to hydrogen peroxide
GO:0043167	F	ion binding
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response
GO:0080142	P	regulation of salicylic acid biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network