result

Gene information

Detail information of AfisC1G06746

Location

Gene	Chr	Start	End	Strand
AfisC1G06746	chr1	1224313801	1224315384	-

Sequences

CDS

>AfisC1G06746
ATGGACCAAGATCAGGCGTACAGTTGCAGGTTTTGCTTTAAGATTTTTCCTTCTCGTAGCTCTTTAGGGGGGCACGTGAGATCCCATATGTTTTCTTCTTCTTCTTCCTCAAACGAGGATAAAGATCAGAAGCTTCAATCAGGTAACGGGTTTCATGGAGCCAATGCTTCATGTTATGGATTGAGAAAGAATCCTAGAAAGACCAAAAGATTCATTATTTCCACAACTTCTACCACTGCTGATCATAAAGATGAGCAGCAGTGTATCGTTTGTAGCCAAGCATTCGATTCCAGAGAAGCTCTATATTGCCATATGAAAAATCATTCCGACAAAGGTAAAATTGTAATCCAAGACAACCACAATGAACAACAAGAAGAAAACCAAGTTGGTCACGAAAATTCATTGAGTAGTAGATCATGTACTATAAGGCTGACTGTGCCTATAAAGAAGAAGAGATCGAAGCGCGCTTTTGTGTTTTCTTCTTCCTCTTCATTATTTCCAGAGTTCAAGCATAGCAACAAGCTTCAAGATGCTGTGGACAGTCTAATGATGCTGTCACAAGATGCAGTATGTTTTAGCATTACTAAAGATGTTAGTGAAAACGATAAGTATGATTCTGATTCTGATTCTGATTACTTCAATGTAGAAAGTAGTTCTCCTGATTCTTTAATGGAGATTAAGAAAATTAACTTTGATGCTAGCTATCACAAGGATATAAGCAAGTGTAACGATTCTATAATGAGAAAATATGAGTGCATTATTTGCAAGAAGAGCTTTGCGACATATCAAGCGCTTGGTGGACACAATGCAAATCATAGAAGAATGAGAAGCTGTGCTATTGAGGTTTCCCAAGAAGTAGCTGGAAGTAGTATAAATAAACATGAATGTTCTATTTGTGGGAGAGTTTTTAGTTCTGGGAATGCCTTAGGAGGGCATAAGAGGTCTCATTTTATCATGGCAGTACCAATTGCATTGAATCAAGAAGAGAATAATGAAGAGAATGTGAAGGTGATTGATCTTAATGTTCCTGCTAGGATTGATGACGATGAGGATGATGATGTCGAACCTTTCTTAGATGAAAGTATGGTTACAGAATGA

Protein

Gene

>AfisC1G06746
TTCTCTACTTCGTCGTTTAGCTTCACTTTCATGCACGATTTTCTCAACTCGCTTTTCATTCTCTTCTCCAATTCTCTTTTCTTAAATCATTCGAAGCTCAAATCGGATTGCCACATTTACTACAATTGAGTTTGGCAGCACTCATTTGGCTAATCCAATCAGATCACAATTAATATTTTGCTAATGGGTCTTTCTCAAATCATCTAAACTACAATTTCCGATCGATTTCAGATCAACCCAACTCGAAAAGAAAGAATCTTGCTTCTTCTTTCTATTGATTTCCTGAAATACCCAATATTTCTTCAGTTCTCATCCATTTTTGATCACGTAAATGGACCAAGATCAGGCGTACAGTTGCAGGTTTTGCTTTAAGATTTTTCCTTCTCGTAGCTCTTTAGGGGGGCACGTGAGATCCCATATGTTTTCTTCTTCTTCTTCCTCAAACGAGGATAAAGATCAGAAGCTTCAATCAGGTAACGGGTTTCATGGAGCCAATGCTTCATGTTATGGATTGAGAAAGAATCCTAGAAAGACCAAAAGATTCATTATTTCCACAACTTCTACCACTGCTGATCATAAAGATGAGCAGCAGTGTATCGTTTGTAGCCAAGCATTCGATTCCAGAGAAGCTCTATATTGCCATATGAAAAATCATTCCGACAAAGGTAAAATTGTAATCCAAGACAACCACAATGAACAACAAGAAGAAAACCAAGTTGGTCACGAAAATTCATTGAGTAGTAGATCATGTACTATAAGGCTGACTGTGCCTATAAAGAAGAAGAGATCGAAGCGCGCTTTTGTGTTTTCTTCTTCCTCTTCATTATTTCCAGAGTTCAAGCATAGCAACAAGCTTCAAGATGCTGTGGACAGTCTAATGATGCTGTCACAAGATGCAGTATGTTTTAGCATTACTAAAGATGTTAGTGAAAACGATAAGTATGATTCTGATTCTGATTCTGATTACTTCAATGTAGAAAGTAGTTCTCCTGATTCTTTAATGGAGATTAAGAAAATTAACTTTGATGCTAGCTATCACAAGGATATAAGCAAGTGTAACGATTCTATAATGAGAAAATATGAGTGCATTATTTGCAAGAAGAGCTTTGCGACATATCAAGCGCTTGGTGGACACAATGCAAATCATAGAAGAATGAGAAGCTGTGCTATTGAGGTTTCCCAAGAAGTAGCTGGAAGTAGTATAAATAAACATGAATGTTCTATTTGTGGGAGAGTTTTTAGTTCTGGGAATGCCTTAGGAGGGCATAAGAGGTCTCATTTTATCATGGCAGTACCAATTGCATTGAATCAAGAAGAGAATAATGAAGAGAATGTGAAGGTGATTGATCTTAATGTTCCTGCTAGGATTGATGACGATGAGGATGATGATGTCGAACCTTTCTTAGATGAAAGTATGGTTACAGAATGAGAGTTCATGTCCTGGTGCCTGATTGTTTTAGTGAAATTTTTTTCTGTTTGCATTAGGAAGAATAAGGTCATGTTAGTATTCTTCTTAGTATGCCAGTAGTGTTGATTAGATCAGTGCTTTGTAAGTTGTAGAGCTTTGTGCTGCACATTGAGTTG

Functional annotation

Database	accession number	e-value	annotation
nr	PKA65889.1	6.3e-20	Zinc finger protein ZAT9
trEMBL	A0A2I0BDL4	4.6e-20	Zinc finger protein ZAT9

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G60580.1	27.97	1e-18	90.9		C2H2-like zinc finger protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC1G06746	AT3G60580.1	311	144	10	87	350	5	282	27.97	1e-18	90.9
AfisC1G06746	AT2G45120.1	114	52	4	249	350	193	306	43.86	2e-17	87.0
AfisC1G06746	AT1G26610.1	207	105	6	3	189	5	192	30.43	2e-16	83.6

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13912.3	zf-C2H2_6	Domain	250	274	40.8	1.3e-10
PF13912.3	zf-C2H2_6	Domain	294	316	41.9	5.8e-11

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network